Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp6nlQ80XC3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp6nlQ80XC3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp6nlQ80XC3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp6nlQ80XC3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp6nlQ80XC3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp6nlQ80XC3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.36■■□□□ 1.17
Usp6nlQ80XC3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Usp6nlQ80XC3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Usp6nlQ80XC3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.35■■□□□ 1.17
Usp6nlQ80XC3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Usp6nlQ80XC3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Usp6nlQ80XC3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Usp6nlQ80XC3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Usp6nlQ80XC3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.35■■□□□ 1.17
Usp6nlQ80XC3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 Gm18671-201ENSMUST00000214826 683 ntBASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Usp6nlQ80XC3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Usp6nlQ80XC3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.33■■□□□ 1.17
Usp6nlQ80XC3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Usp6nlQ80XC3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.17
Usp6nlQ80XC3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.33■■□□□ 1.17
Usp6nlQ80XC3 AV356131-201ENSMUST00000206201 750 ntBASIC22.33■■□□□ 1.17
Usp6nlQ80XC3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.33■■□□□ 1.17
Usp6nlQ80XC3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Usp6nlQ80XC3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Usp6nlQ80XC3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp6nlQ80XC3 Gm11421-201ENSMUST00000122124 294 ntBASIC22.32■■□□□ 1.16
Usp6nlQ80XC3 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.32■■□□□ 1.16
Usp6nlQ80XC3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp6nlQ80XC3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Usp6nlQ80XC3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp6nlQ80XC3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp6nlQ80XC3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Usp6nlQ80XC3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp6nlQ80XC3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Usp6nlQ80XC3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Usp6nlQ80XC3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp6nlQ80XC3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Usp6nlQ80XC3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Usp6nlQ80XC3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Usp6nlQ80XC3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp6nlQ80XC3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp6nlQ80XC3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp6nlQ80XC3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Usp6nlQ80XC3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp6nlQ80XC3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp6nlQ80XC3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp6nlQ80XC3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp6nlQ80XC3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
Usp6nlQ80XC3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp6nlQ80XC3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp6nlQ80XC3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp6nlQ80XC3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Usp6nlQ80XC3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Usp6nlQ80XC3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp6nlQ80XC3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp6nlQ80XC3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp6nlQ80XC3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Usp6nlQ80XC3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Usp6nlQ80XC3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp6nlQ80XC3 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.28■■□□□ 1.16
Usp6nlQ80XC3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Usp6nlQ80XC3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Usp6nlQ80XC3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Usp6nlQ80XC3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Usp6nlQ80XC3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp6nlQ80XC3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Usp6nlQ80XC3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Usp6nlQ80XC3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Usp6nlQ80XC3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Usp6nlQ80XC3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Usp6nlQ80XC3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Usp6nlQ80XC3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.26■■□□□ 1.15
Usp6nlQ80XC3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Usp6nlQ80XC3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.26■■□□□ 1.15
Usp6nlQ80XC3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Usp6nlQ80XC3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Usp6nlQ80XC3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Usp6nlQ80XC3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp6nlQ80XC3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.25■■□□□ 1.15
Usp6nlQ80XC3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp6nlQ80XC3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp6nlQ80XC3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Usp6nlQ80XC3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp6nlQ80XC3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp6nlQ80XC3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Usp6nlQ80XC3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
Usp6nlQ80XC3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms