Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm8Q6ZWM4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm8Q6ZWM4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm8Q6ZWM4 Mir6236-201ENSMUST00000184437 123 ntBASIC21.18■□□□□ 0.98
Lsm8Q6ZWM4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Lsm8Q6ZWM4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm8Q6ZWM4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm8Q6ZWM4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm8Q6ZWM4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm8Q6ZWM4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Lsm8Q6ZWM4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.17■□□□□ 0.98
Lsm8Q6ZWM4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.17■□□□□ 0.98
Lsm8Q6ZWM4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm8Q6ZWM4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm8Q6ZWM4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Lsm8Q6ZWM4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm8Q6ZWM4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm8Q6ZWM4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm8Q6ZWM4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm8Q6ZWM4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.16■□□□□ 0.98
Lsm8Q6ZWM4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm8Q6ZWM4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm8Q6ZWM4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Lsm8Q6ZWM4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm8Q6ZWM4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm8Q6ZWM4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm8Q6ZWM4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Lsm8Q6ZWM4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm8Q6ZWM4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.14■□□□□ 0.98
Lsm8Q6ZWM4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lsm8Q6ZWM4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Lsm8Q6ZWM4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lsm8Q6ZWM4 Gm12922-201ENSMUST00000120626 809 ntBASIC21.14■□□□□ 0.97
Lsm8Q6ZWM4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm8Q6ZWM4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
Lsm8Q6ZWM4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm8Q6ZWM4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Lsm8Q6ZWM4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm8Q6ZWM4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Lsm8Q6ZWM4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Lsm8Q6ZWM4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm8Q6ZWM4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm8Q6ZWM4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm8Q6ZWM4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm8Q6ZWM4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm8Q6ZWM4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.13■□□□□ 0.97
Lsm8Q6ZWM4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.13■□□□□ 0.97
Lsm8Q6ZWM4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm8Q6ZWM4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lsm8Q6ZWM4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm8Q6ZWM4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm8Q6ZWM4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm8Q6ZWM4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm8Q6ZWM4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.12■□□□□ 0.97
Lsm8Q6ZWM4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Lsm8Q6ZWM4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.12■□□□□ 0.97
Lsm8Q6ZWM4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm8Q6ZWM4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Lsm8Q6ZWM4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm8Q6ZWM4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Lsm8Q6ZWM4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm8Q6ZWM4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm8Q6ZWM4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Lsm8Q6ZWM4 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.11■□□□□ 0.97
Lsm8Q6ZWM4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm8Q6ZWM4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm8Q6ZWM4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm8Q6ZWM4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm8Q6ZWM4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm8Q6ZWM4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm8Q6ZWM4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm8Q6ZWM4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.1■□□□□ 0.97
Lsm8Q6ZWM4 Golgb1-201ENSMUST00000023534 498 ntBASIC21.1■□□□□ 0.97
Lsm8Q6ZWM4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm8Q6ZWM4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm8Q6ZWM4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Lsm8Q6ZWM4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm8Q6ZWM4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm8Q6ZWM4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm8Q6ZWM4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm8Q6ZWM4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Lsm8Q6ZWM4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm8Q6ZWM4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.08■□□□□ 0.97
Lsm8Q6ZWM4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Lsm8Q6ZWM4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm8Q6ZWM4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm8Q6ZWM4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm8Q6ZWM4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms