Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shkbp1Q6P7W2 Gm29257-201ENSMUST00000186115 639 ntBASIC21.13■□□□□ 0.97
Shkbp1Q6P7W2 Gm7291-201ENSMUST00000199147 382 ntBASIC21.13■□□□□ 0.97
Shkbp1Q6P7W2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.13■□□□□ 0.97
Shkbp1Q6P7W2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shkbp1Q6P7W2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shkbp1Q6P7W2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Gm42642-201ENSMUST00000200683 355 ntBASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shkbp1Q6P7W2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Gm42569-201ENSMUST00000200539 472 ntBASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shkbp1Q6P7W2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shkbp1Q6P7W2 Gm10849-201ENSMUST00000100397 618 ntBASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Gm11421-201ENSMUST00000122124 294 ntBASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shkbp1Q6P7W2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Shkbp1Q6P7W2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shkbp1Q6P7W2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Shkbp1Q6P7W2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.08■□□□□ 0.97
Shkbp1Q6P7W2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.08■□□□□ 0.97
Shkbp1Q6P7W2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shkbp1Q6P7W2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Gm27405-201ENSMUST00000184201 112 ntBASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shkbp1Q6P7W2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Shkbp1Q6P7W2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.06■□□□□ 0.96
Shkbp1Q6P7W2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shkbp1Q6P7W2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.06■□□□□ 0.96
Shkbp1Q6P7W2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shkbp1Q6P7W2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shkbp1Q6P7W2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shkbp1Q6P7W2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.04■□□□□ 0.96
Shkbp1Q6P7W2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shkbp1Q6P7W2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Shkbp1Q6P7W2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shkbp1Q6P7W2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shkbp1Q6P7W2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Shkbp1Q6P7W2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shkbp1Q6P7W2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shkbp1Q6P7W2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms