Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcd1Q61466 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcd1Q61466 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcd1Q61466 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcd1Q61466 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcd1Q61466 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcd1Q61466 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcd1Q61466 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcd1Q61466 Gm6139-201ENSMUST00000079261 882 ntBASIC21.03■□□□□ 0.96
Smarcd1Q61466 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcd1Q61466 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcd1Q61466 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcd1Q61466 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcd1Q61466 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcd1Q61466 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcd1Q61466 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.02■□□□□ 0.96
Smarcd1Q61466 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcd1Q61466 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcd1Q61466 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcd1Q61466 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Smarcd1Q61466 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Smarcd1Q61466 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Smarcd1Q61466 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Smarcd1Q61466 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcd1Q61466 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Smarcd1Q61466 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcd1Q61466 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.01■□□□□ 0.95
Smarcd1Q61466 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcd1Q61466 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcd1Q61466 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Smarcd1Q61466 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarcd1Q61466 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.01■□□□□ 0.95
Smarcd1Q61466 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21■□□□□ 0.95
Smarcd1Q61466 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Smarcd1Q61466 Gm12251-201ENSMUST00000117893 792 ntBASIC21■□□□□ 0.95
Smarcd1Q61466 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcd1Q61466 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcd1Q61466 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcd1Q61466 Gm10209-201ENSMUST00000203397 1607 ntBASIC21■□□□□ 0.95
Smarcd1Q61466 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarcd1Q61466 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Smarcd1Q61466 Gm8493-201ENSMUST00000196881 489 ntBASIC20.99■□□□□ 0.95
Smarcd1Q61466 Spcs1-204ENSMUST00000226782 949 ntBASIC20.99■□□□□ 0.95
Smarcd1Q61466 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.99■□□□□ 0.95
Smarcd1Q61466 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcd1Q61466 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.99■□□□□ 0.95
Smarcd1Q61466 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarcd1Q61466 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcd1Q61466 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcd1Q61466 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcd1Q61466 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcd1Q61466 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Smarcd1Q61466 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Smarcd1Q61466 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.98■□□□□ 0.95
Smarcd1Q61466 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcd1Q61466 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
Smarcd1Q61466 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcd1Q61466 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smarcd1Q61466 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcd1Q61466 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Smarcd1Q61466 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcd1Q61466 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcd1Q61466 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.97■□□□□ 0.95
Smarcd1Q61466 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcd1Q61466 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcd1Q61466 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.97■□□□□ 0.95
Smarcd1Q61466 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smarcd1Q61466 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Smarcd1Q61466 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd1Q61466 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd1Q61466 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd1Q61466 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd1Q61466 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd1Q61466 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.96■□□□□ 0.95
Smarcd1Q61466 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd1Q61466 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd1Q61466 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd1Q61466 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smarcd1Q61466 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Smarcd1Q61466 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.95■□□□□ 0.94
Smarcd1Q61466 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Smarcd1Q61466 Serp2-204ENSMUST00000228055 705 ntBASIC20.95■□□□□ 0.94
Smarcd1Q61466 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smarcd1Q61466 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Smarcd1Q61466 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd1Q61466 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd1Q61466 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
Smarcd1Q61466 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd1Q61466 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd1Q61466 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd1Q61466 Gm43173-201ENSMUST00000202246 593 ntBASIC20.94■□□□□ 0.94
Smarcd1Q61466 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd1Q61466 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd1Q61466 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd1Q61466 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smarcd1Q61466 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Smarcd1Q61466 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Smarcd1Q61466 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcd1Q61466 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smarcd1Q61466 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms