Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Uspl1Q3ULM6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Uspl1Q3ULM6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Uspl1Q3ULM6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC26.2■■□□□ 1.79
Uspl1Q3ULM6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.78
Uspl1Q3ULM6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Uspl1Q3ULM6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.2■■□□□ 1.78
Uspl1Q3ULM6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Uspl1Q3ULM6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Uspl1Q3ULM6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
Uspl1Q3ULM6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Uspl1Q3ULM6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Uspl1Q3ULM6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Uspl1Q3ULM6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC26.19■■□□□ 1.78
Uspl1Q3ULM6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Uspl1Q3ULM6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Uspl1Q3ULM6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Uspl1Q3ULM6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Uspl1Q3ULM6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC26.18■■□□□ 1.78
Uspl1Q3ULM6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Uspl1Q3ULM6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC26.18■■□□□ 1.78
Uspl1Q3ULM6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Uspl1Q3ULM6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
Uspl1Q3ULM6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Uspl1Q3ULM6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Uspl1Q3ULM6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Uspl1Q3ULM6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Uspl1Q3ULM6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC26.17■■□□□ 1.78
Uspl1Q3ULM6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC26.17■■□□□ 1.78
Uspl1Q3ULM6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
Uspl1Q3ULM6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Uspl1Q3ULM6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Uspl1Q3ULM6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Uspl1Q3ULM6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Uspl1Q3ULM6 Gm6085-201ENSMUST00000182774 1470 ntBASIC26.17■■□□□ 1.78
Uspl1Q3ULM6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Uspl1Q3ULM6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Uspl1Q3ULM6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC26.16■■□□□ 1.78
Uspl1Q3ULM6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Uspl1Q3ULM6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC26.16■■□□□ 1.78
Uspl1Q3ULM6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Uspl1Q3ULM6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC26.16■■□□□ 1.78
Uspl1Q3ULM6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC26.16■■□□□ 1.78
Uspl1Q3ULM6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Uspl1Q3ULM6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Uspl1Q3ULM6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Uspl1Q3ULM6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Uspl1Q3ULM6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Uspl1Q3ULM6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Uspl1Q3ULM6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Uspl1Q3ULM6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Uspl1Q3ULM6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Uspl1Q3ULM6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Uspl1Q3ULM6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC26.14■■□□□ 1.78
Uspl1Q3ULM6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Uspl1Q3ULM6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Uspl1Q3ULM6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.77
Uspl1Q3ULM6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC26.14■■□□□ 1.77
Uspl1Q3ULM6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Uspl1Q3ULM6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Uspl1Q3ULM6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Uspl1Q3ULM6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Uspl1Q3ULM6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Uspl1Q3ULM6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Uspl1Q3ULM6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Uspl1Q3ULM6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC26.12■■□□□ 1.77
Uspl1Q3ULM6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Uspl1Q3ULM6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC26.12■■□□□ 1.77
Uspl1Q3ULM6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Uspl1Q3ULM6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Uspl1Q3ULM6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Uspl1Q3ULM6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Uspl1Q3ULM6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Uspl1Q3ULM6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC26.12■■□□□ 1.77
Uspl1Q3ULM6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Uspl1Q3ULM6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Uspl1Q3ULM6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Uspl1Q3ULM6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC26.1■■□□□ 1.77
Uspl1Q3ULM6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Uspl1Q3ULM6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Uspl1Q3ULM6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Uspl1Q3ULM6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC26.09■■□□□ 1.77
Uspl1Q3ULM6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Uspl1Q3ULM6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
Uspl1Q3ULM6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Uspl1Q3ULM6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC26.09■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms