Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim63Q38HM4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim63Q38HM4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim63Q38HM4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim63Q38HM4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim63Q38HM4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim63Q38HM4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim63Q38HM4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim63Q38HM4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim63Q38HM4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim63Q38HM4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim63Q38HM4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim63Q38HM4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim63Q38HM4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim63Q38HM4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim63Q38HM4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim63Q38HM4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim63Q38HM4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim63Q38HM4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim63Q38HM4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim63Q38HM4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim63Q38HM4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim63Q38HM4 Rarb-207ENSMUST00000225921 2756 ntBASIC16.66■□□□□ 0.26
Trim63Q38HM4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim63Q38HM4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trim63Q38HM4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim63Q38HM4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim63Q38HM4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim63Q38HM4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim63Q38HM4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim63Q38HM4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim63Q38HM4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim63Q38HM4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim63Q38HM4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim63Q38HM4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim63Q38HM4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim63Q38HM4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim63Q38HM4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim63Q38HM4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim63Q38HM4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim63Q38HM4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim63Q38HM4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim63Q38HM4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim63Q38HM4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim63Q38HM4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim63Q38HM4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim63Q38HM4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim63Q38HM4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
Trim63Q38HM4 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.64■□□□□ 0.25
Trim63Q38HM4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim63Q38HM4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim63Q38HM4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim63Q38HM4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim63Q38HM4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.64■□□□□ 0.25
Trim63Q38HM4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim63Q38HM4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim63Q38HM4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim63Q38HM4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim63Q38HM4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim63Q38HM4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim63Q38HM4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim63Q38HM4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim63Q38HM4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim63Q38HM4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim63Q38HM4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim63Q38HM4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim63Q38HM4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.62■□□□□ 0.25
Trim63Q38HM4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim63Q38HM4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim63Q38HM4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.61■□□□□ 0.25
Trim63Q38HM4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim63Q38HM4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim63Q38HM4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms