Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col10a1Q05306 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col10a1Q05306 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col10a1Q05306 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col10a1Q05306 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col10a1Q05306 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col10a1Q05306 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col10a1Q05306 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col10a1Q05306 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col10a1Q05306 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col10a1Q05306 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col10a1Q05306 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Col10a1Q05306 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col10a1Q05306 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Col10a1Q05306 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col10a1Q05306 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col10a1Q05306 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col10a1Q05306 Gm13241-201ENSMUST00000094493 780 ntBASIC18.52■□□□□ 0.56
Col10a1Q05306 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Col10a1Q05306 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col10a1Q05306 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col10a1Q05306 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col10a1Q05306 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col10a1Q05306 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col10a1Q05306 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col10a1Q05306 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col10a1Q05306 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col10a1Q05306 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.51■□□□□ 0.55
Col10a1Q05306 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col10a1Q05306 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col10a1Q05306 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col10a1Q05306 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.51■□□□□ 0.55
Col10a1Q05306 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col10a1Q05306 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.51■□□□□ 0.55
Col10a1Q05306 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col10a1Q05306 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col10a1Q05306 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col10a1Q05306 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col10a1Q05306 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col10a1Q05306 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col10a1Q05306 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Col10a1Q05306 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col10a1Q05306 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col10a1Q05306 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col10a1Q05306 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col10a1Q05306 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Col10a1Q05306 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col10a1Q05306 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col10a1Q05306 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col10a1Q05306 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.5■□□□□ 0.55
Col10a1Q05306 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Col10a1Q05306 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col10a1Q05306 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col10a1Q05306 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Col10a1Q05306 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col10a1Q05306 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col10a1Q05306 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col10a1Q05306 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col10a1Q05306 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.5■□□□□ 0.55
Col10a1Q05306 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col10a1Q05306 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.49■□□□□ 0.55
Col10a1Q05306 Gm21956-201ENSMUST00000179946 522 ntBASIC18.49■□□□□ 0.55
Col10a1Q05306 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col10a1Q05306 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col10a1Q05306 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.49■□□□□ 0.55
Col10a1Q05306 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col10a1Q05306 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col10a1Q05306 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col10a1Q05306 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col10a1Q05306 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col10a1Q05306 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.48■□□□□ 0.55
Col10a1Q05306 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.48■□□□□ 0.55
Col10a1Q05306 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.48■□□□□ 0.55
Col10a1Q05306 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.48■□□□□ 0.55
Col10a1Q05306 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.48■□□□□ 0.55
Col10a1Q05306 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col10a1Q05306 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Col10a1Q05306 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col10a1Q05306 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col10a1Q05306 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.48■□□□□ 0.55
Col10a1Q05306 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col10a1Q05306 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Col10a1Q05306 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col10a1Q05306 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.47■□□□□ 0.55
Col10a1Q05306 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col10a1Q05306 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col10a1Q05306 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Col10a1Q05306 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col10a1Q05306 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.46■□□□□ 0.55
Col10a1Q05306 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col10a1Q05306 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col10a1Q05306 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col10a1Q05306 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col10a1Q05306 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col10a1Q05306 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col10a1Q05306 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.45■□□□□ 0.54
Col10a1Q05306 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col10a1Q05306 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Col10a1Q05306 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Col10a1Q05306 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms