Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc1a3P56564 Gm11175-201ENSMUST00000116172 543 ntBASIC18.02■□□□□ 0.48
Slc1a3P56564 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc1a3P56564 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.02■□□□□ 0.48
Slc1a3P56564 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc1a3P56564 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc1a3P56564 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc1a3P56564 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.02■□□□□ 0.47
Slc1a3P56564 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Slc1a3P56564 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc1a3P56564 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.02■□□□□ 0.47
Slc1a3P56564 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Slc1a3P56564 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Slc1a3P56564 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc1a3P56564 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a3P56564 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a3P56564 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Slc1a3P56564 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a3P56564 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a3P56564 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc1a3P56564 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.01■□□□□ 0.47
Slc1a3P56564 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a3P56564 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc1a3P56564 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc1a3P56564 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a3P56564 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a3P56564 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc1a3P56564 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc1a3P56564 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a3P56564 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a3P56564 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a3P56564 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18■□□□□ 0.47
Slc1a3P56564 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a3P56564 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc1a3P56564 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a3P56564 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a3P56564 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a3P56564 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a3P56564 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a3P56564 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Slc1a3P56564 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.99■□□□□ 0.47
Slc1a3P56564 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc1a3P56564 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a3P56564 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.98■□□□□ 0.47
Slc1a3P56564 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Slc1a3P56564 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a3P56564 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Slc1a3P56564 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a3P56564 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a3P56564 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.98■□□□□ 0.47
Slc1a3P56564 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc1a3P56564 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Slc1a3P56564 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.97■□□□□ 0.47
Slc1a3P56564 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a3P56564 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a3P56564 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a3P56564 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a3P56564 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc1a3P56564 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Slc1a3P56564 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 Gm10420-201ENSMUST00000121713 882 ntBASIC17.96■□□□□ 0.47
Slc1a3P56564 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.96■□□□□ 0.47
Slc1a3P56564 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Slc1a3P56564 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.96■□□□□ 0.47
Slc1a3P56564 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.96■□□□□ 0.47
Slc1a3P56564 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc1a3P56564 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Slc1a3P56564 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a3P56564 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a3P56564 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a3P56564 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a3P56564 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.95■□□□□ 0.46
Slc1a3P56564 Mir6538-201ENSMUST00000183713 110 ntBASIC17.95■□□□□ 0.46
Slc1a3P56564 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Slc1a3P56564 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a3P56564 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a3P56564 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Slc1a3P56564 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.95■□□□□ 0.46
Slc1a3P56564 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a3P56564 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a3P56564 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc1a3P56564 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.94■□□□□ 0.46
Slc1a3P56564 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Slc1a3P56564 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc1a3P56564 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.94■□□□□ 0.46
Slc1a3P56564 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Slc1a3P56564 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc1a3P56564 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Slc1a3P56564 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 196.5 ms