Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdh4P39038 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh4P39038 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh4P39038 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh4P39038 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.21■□□□□ 0.67
Cdh4P39038 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.21■□□□□ 0.67
Cdh4P39038 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh4P39038 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh4P39038 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh4P39038 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh4P39038 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cdh4P39038 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh4P39038 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh4P39038 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cdh4P39038 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh4P39038 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh4P39038 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdh4P39038 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh4P39038 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh4P39038 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh4P39038 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh4P39038 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.2■□□□□ 0.66
Cdh4P39038 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.2■□□□□ 0.66
Cdh4P39038 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh4P39038 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdh4P39038 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh4P39038 Notumos-201ENSMUST00000151998 2659 ntBASIC19.19■□□□□ 0.66
Cdh4P39038 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh4P39038 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cdh4P39038 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.19■□□□□ 0.66
Cdh4P39038 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.19■□□□□ 0.66
Cdh4P39038 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh4P39038 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh4P39038 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh4P39038 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh4P39038 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdh4P39038 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cdh4P39038 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh4P39038 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh4P39038 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh4P39038 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh4P39038 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Cdh4P39038 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh4P39038 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.18■□□□□ 0.66
Cdh4P39038 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdh4P39038 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh4P39038 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh4P39038 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh4P39038 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh4P39038 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh4P39038 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh4P39038 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh4P39038 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh4P39038 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh4P39038 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh4P39038 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh4P39038 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cdh4P39038 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cdh4P39038 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh4P39038 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh4P39038 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh4P39038 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh4P39038 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh4P39038 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh4P39038 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh4P39038 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh4P39038 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Cdh4P39038 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdh4P39038 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh4P39038 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh4P39038 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh4P39038 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cdh4P39038 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cdh4P39038 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cdh4P39038 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.14■□□□□ 0.65
Cdh4P39038 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.14■□□□□ 0.65
Cdh4P39038 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh4P39038 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh4P39038 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh4P39038 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh4P39038 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cdh4P39038 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Cdh4P39038 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh4P39038 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cdh4P39038 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh4P39038 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh4P39038 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cdh4P39038 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cdh4P39038 Gm12821-201ENSMUST00000120022 600 ntBASIC19.13■□□□□ 0.65
Cdh4P39038 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh4P39038 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.13■□□□□ 0.65
Cdh4P39038 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.13■□□□□ 0.65
Cdh4P39038 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.13■□□□□ 0.65
Cdh4P39038 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh4P39038 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh4P39038 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.12■□□□□ 0.65
Cdh4P39038 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Cdh4P39038 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.12■□□□□ 0.65
Cdh4P39038 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.12■□□□□ 0.65
Cdh4P39038 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms