Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxb3P09026 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Hoxb3P09026 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.08■□□□□ 0.81
Hoxb3P09026 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxb3P09026 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.08■□□□□ 0.81
Hoxb3P09026 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxb3P09026 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxb3P09026 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxb3P09026 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxb3P09026 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.07■□□□□ 0.8
Hoxb3P09026 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.07■□□□□ 0.8
Hoxb3P09026 Gm43530-201ENSMUST00000195920 274 ntBASIC20.07■□□□□ 0.8
Hoxb3P09026 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxb3P09026 Gm10033-202ENSMUST00000211874 928 ntBASIC20.07■□□□□ 0.8
Hoxb3P09026 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.07■□□□□ 0.8
Hoxb3P09026 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.07■□□□□ 0.8
Hoxb3P09026 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxb3P09026 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.07■□□□□ 0.8
Hoxb3P09026 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxb3P09026 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxb3P09026 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxb3P09026 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxb3P09026 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxb3P09026 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxb3P09026 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxb3P09026 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Hoxb3P09026 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxb3P09026 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxb3P09026 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.05■□□□□ 0.8
Hoxb3P09026 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.05■□□□□ 0.8
Hoxb3P09026 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.05■□□□□ 0.8
Hoxb3P09026 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.05■□□□□ 0.8
Hoxb3P09026 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxb3P09026 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxb3P09026 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxb3P09026 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxb3P09026 Gm43060-201ENSMUST00000200621 289 ntBASIC20.04■□□□□ 0.8
Hoxb3P09026 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.04■□□□□ 0.8
Hoxb3P09026 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.04■□□□□ 0.8
Hoxb3P09026 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Hoxb3P09026 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hoxb3P09026 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxb3P09026 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxb3P09026 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hoxb3P09026 Gm25925-201ENSMUST00000158314 306 ntBASIC20.03■□□□□ 0.8
Hoxb3P09026 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.03■□□□□ 0.8
Hoxb3P09026 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxb3P09026 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxb3P09026 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hoxb3P09026 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxb3P09026 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxb3P09026 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxb3P09026 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxb3P09026 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Hoxb3P09026 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hoxb3P09026 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxb3P09026 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hoxb3P09026 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Hoxb3P09026 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Hoxb3P09026 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxb3P09026 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxb3P09026 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxb3P09026 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.01■□□□□ 0.79
Hoxb3P09026 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.01■□□□□ 0.79
Hoxb3P09026 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxb3P09026 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxb3P09026 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxb3P09026 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
Hoxb3P09026 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.01■□□□□ 0.79
Hoxb3P09026 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxb3P09026 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxb3P09026 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Hoxb3P09026 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxb3P09026 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxb3P09026 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Hoxb3P09026 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxb3P09026 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20■□□□□ 0.79
Hoxb3P09026 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxb3P09026 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxb3P09026 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxb3P09026 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hoxb3P09026 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxb3P09026 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxb3P09026 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.99■□□□□ 0.79
Hoxb3P09026 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hoxb3P09026 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.99■□□□□ 0.79
Hoxb3P09026 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxb3P09026 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.99■□□□□ 0.79
Hoxb3P09026 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxb3P09026 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Hoxb3P09026 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxb3P09026 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxb3P09026 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Hoxb3P09026 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxb3P09026 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Hoxb3P09026 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxb3P09026 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxb3P09026 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.98■□□□□ 0.79
Hoxb3P09026 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.98■□□□□ 0.79
Hoxb3P09026 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 867 ms