Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.64■□□□□ 0.73
Cdh16O88338 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh16O88338 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh16O88338 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh16O88338 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh16O88338 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cdh16O88338 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh16O88338 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh16O88338 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh16O88338 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh16O88338 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh16O88338 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh16O88338 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh16O88338 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh16O88338 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh16O88338 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh16O88338 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh16O88338 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh16O88338 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh16O88338 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.62■□□□□ 0.73
Cdh16O88338 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cdh16O88338 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh16O88338 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh16O88338 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh16O88338 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh16O88338 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh16O88338 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh16O88338 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh16O88338 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.61■□□□□ 0.73
Cdh16O88338 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh16O88338 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cdh16O88338 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh16O88338 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdh16O88338 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Cdh16O88338 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh16O88338 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh16O88338 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh16O88338 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh16O88338 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh16O88338 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.6■□□□□ 0.73
Cdh16O88338 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.6■□□□□ 0.73
Cdh16O88338 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh16O88338 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh16O88338 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh16O88338 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cdh16O88338 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.59■□□□□ 0.73
Cdh16O88338 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh16O88338 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.59■□□□□ 0.73
Cdh16O88338 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.59■□□□□ 0.73
Cdh16O88338 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh16O88338 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cdh16O88338 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh16O88338 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh16O88338 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cdh16O88338 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cdh16O88338 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdh16O88338 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh16O88338 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh16O88338 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh16O88338 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh16O88338 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.58■□□□□ 0.72
Cdh16O88338 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh16O88338 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh16O88338 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh16O88338 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh16O88338 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh16O88338 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh16O88338 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh16O88338 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh16O88338 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.57■□□□□ 0.72
Cdh16O88338 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh16O88338 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh16O88338 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh16O88338 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh16O88338 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh16O88338 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh16O88338 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh16O88338 Gm10420-201ENSMUST00000121713 882 ntBASIC19.56■□□□□ 0.72
Cdh16O88338 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh16O88338 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh16O88338 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh16O88338 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh16O88338 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh16O88338 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh16O88338 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh16O88338 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.55■□□□□ 0.72
Cdh16O88338 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.55■□□□□ 0.72
Cdh16O88338 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.55■□□□□ 0.72
Cdh16O88338 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh16O88338 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh16O88338 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cdh16O88338 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh16O88338 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh16O88338 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh16O88338 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.55■□□□□ 0.72
Cdh16O88338 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh16O88338 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh16O88338 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cdh16O88338 Golph3-205ENSMUST00000228671 2842 ntBASIC19.54■□□□□ 0.72
Cdh16O88338 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms