Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hps1O08983 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Hps1O08983 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hps1O08983 Gm7417-201ENSMUST00000192950 473 ntBASIC18.48■□□□□ 0.55
Hps1O08983 Serp2-204ENSMUST00000228055 705 ntBASIC18.48■□□□□ 0.55
Hps1O08983 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.48■□□□□ 0.55
Hps1O08983 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hps1O08983 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hps1O08983 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hps1O08983 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hps1O08983 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hps1O08983 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Hps1O08983 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hps1O08983 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Hps1O08983 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.47■□□□□ 0.55
Hps1O08983 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hps1O08983 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hps1O08983 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hps1O08983 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hps1O08983 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Hps1O08983 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Hps1O08983 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hps1O08983 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hps1O08983 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hps1O08983 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hps1O08983 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Hps1O08983 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.46■□□□□ 0.55
Hps1O08983 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Hps1O08983 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hps1O08983 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hps1O08983 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.45■□□□□ 0.54
Hps1O08983 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.45■□□□□ 0.54
Hps1O08983 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.45■□□□□ 0.54
Hps1O08983 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hps1O08983 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.44■□□□□ 0.54
Hps1O08983 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hps1O08983 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hps1O08983 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.44■□□□□ 0.54
Hps1O08983 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.44■□□□□ 0.54
Hps1O08983 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hps1O08983 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.44■□□□□ 0.54
Hps1O08983 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hps1O08983 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hps1O08983 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hps1O08983 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hps1O08983 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hps1O08983 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hps1O08983 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.43■□□□□ 0.54
Hps1O08983 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.43■□□□□ 0.54
Hps1O08983 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hps1O08983 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hps1O08983 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.42■□□□□ 0.54
Hps1O08983 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hps1O08983 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Hps1O08983 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hps1O08983 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.42■□□□□ 0.54
Hps1O08983 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hps1O08983 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hps1O08983 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hps1O08983 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Hps1O08983 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.42■□□□□ 0.54
Hps1O08983 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hps1O08983 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hps1O08983 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hps1O08983 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hps1O08983 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hps1O08983 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hps1O08983 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Hps1O08983 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.41■□□□□ 0.54
Hps1O08983 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hps1O08983 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Hps1O08983 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hps1O08983 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hps1O08983 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hps1O08983 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hps1O08983 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hps1O08983 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.4■□□□□ 0.54
Hps1O08983 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps1O08983 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hps1O08983 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps1O08983 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps1O08983 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hps1O08983 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.4■□□□□ 0.54
Hps1O08983 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hps1O08983 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.4■□□□□ 0.54
Hps1O08983 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.4■□□□□ 0.54
Hps1O08983 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hps1O08983 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps1O08983 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps1O08983 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps1O08983 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps1O08983 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.4■□□□□ 0.54
Hps1O08983 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hps1O08983 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hps1O08983 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.4■□□□□ 0.54
Hps1O08983 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hps1O08983 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hps1O08983 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps1O08983 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps1O08983 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms