Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.36■□□□□ 0.05
Trbv17A0A140T8P8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.36■□□□□ 0.05
Trbv17A0A140T8P8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv17A0A140T8P8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv17A0A140T8P8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv17A0A140T8P8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv17A0A140T8P8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trbv17A0A140T8P8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trbv17A0A140T8P8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv17A0A140T8P8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv17A0A140T8P8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Trbv17A0A140T8P8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv17A0A140T8P8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv17A0A140T8P8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv17A0A140T8P8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trbv17A0A140T8P8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv17A0A140T8P8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv17A0A140T8P8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trbv17A0A140T8P8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv17A0A140T8P8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv17A0A140T8P8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv17A0A140T8P8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv17A0A140T8P8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv17A0A140T8P8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv17A0A140T8P8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
Trbv17A0A140T8P8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv17A0A140T8P8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv17A0A140T8P8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv17A0A140T8P8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.33■□□□□ 0.04
Trbv17A0A140T8P8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv17A0A140T8P8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv17A0A140T8P8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv17A0A140T8P8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv17A0A140T8P8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv17A0A140T8P8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trbv17A0A140T8P8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv17A0A140T8P8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.3■□□□□ 0.04
Trbv17A0A140T8P8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.3■□□□□ 0.04
Trbv17A0A140T8P8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.3■□□□□ 0.04
Trbv17A0A140T8P8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv17A0A140T8P8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv17A0A140T8P8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv17A0A140T8P8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv17A0A140T8P8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv17A0A140T8P8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Gm22238-201ENSMUST00000175222 88 ntBASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv17A0A140T8P8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv17A0A140T8P8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv17A0A140T8P8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms