Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13n-2A0A0G2JF93 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13n-2A0A0G2JF93 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-2A0A0G2JF93 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-2A0A0G2JF93 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav13n-2A0A0G2JF93 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-2A0A0G2JF93 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav13n-2A0A0G2JF93 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-2A0A0G2JF93 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav13n-2A0A0G2JF93 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-2A0A0G2JF93 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-2A0A0G2JF93 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-2A0A0G2JF93 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13n-2A0A0G2JF93 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13n-2A0A0G2JF93 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav13n-2A0A0G2JF93 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 AC117769.4-201ENSMUST00000225679 685 ntBASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.25□□□□□ -0.29
Trav13n-2A0A0G2JF93 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-2A0A0G2JF93 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms