Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trbv5A0A0B4J1G9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trbv5A0A0B4J1G9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv5A0A0B4J1G9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv5A0A0B4J1G9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trbv5A0A0B4J1G9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv5A0A0B4J1G9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv5A0A0B4J1G9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv5A0A0B4J1G9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trbv5A0A0B4J1G9 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.15■□□□□ 0.18
Trbv5A0A0B4J1G9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv5A0A0B4J1G9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trbv5A0A0B4J1G9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv5A0A0B4J1G9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv5A0A0B4J1G9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv5A0A0B4J1G9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv5A0A0B4J1G9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv5A0A0B4J1G9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv5A0A0B4J1G9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv5A0A0B4J1G9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.13■□□□□ 0.17
Trbv5A0A0B4J1G9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv5A0A0B4J1G9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv5A0A0B4J1G9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trbv5A0A0B4J1G9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv5A0A0B4J1G9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Trbv5A0A0B4J1G9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv5A0A0B4J1G9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv5A0A0B4J1G9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv5A0A0B4J1G9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv5A0A0B4J1G9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv5A0A0B4J1G9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv5A0A0B4J1G9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv5A0A0B4J1G9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv5A0A0B4J1G9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv5A0A0B4J1G9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv5A0A0B4J1G9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv5A0A0B4J1G9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv5A0A0B4J1G9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv5A0A0B4J1G9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trbv5A0A0B4J1G9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trbv5A0A0B4J1G9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv5A0A0B4J1G9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trbv5A0A0B4J1G9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Trbv5A0A0B4J1G9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv5A0A0B4J1G9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.09■□□□□ 0.17
Trbv5A0A0B4J1G9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv5A0A0B4J1G9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv5A0A0B4J1G9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv5A0A0B4J1G9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.09■□□□□ 0.17
Trbv5A0A0B4J1G9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv5A0A0B4J1G9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trbv5A0A0B4J1G9 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.09■□□□□ 0.17
Trbv5A0A0B4J1G9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv5A0A0B4J1G9 Golph3-205ENSMUST00000228671 2842 ntBASIC16.09■□□□□ 0.17
Trbv5A0A0B4J1G9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trbv5A0A0B4J1G9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.08■□□□□ 0.16
Trbv5A0A0B4J1G9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv5A0A0B4J1G9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.08■□□□□ 0.16
Trbv5A0A0B4J1G9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.08■□□□□ 0.16
Trbv5A0A0B4J1G9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv5A0A0B4J1G9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms