Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-7A0A075B6B0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 Gm10399-202ENSMUST00000202768 748 ntBASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 Gm40881-201ENSMUST00000223397 166 ntBASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav6d-7A0A075B6B0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Trav6d-7A0A075B6B0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-7A0A075B6B0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-7A0A075B6B0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-7A0A075B6B0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav6d-7A0A075B6B0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav6d-7A0A075B6B0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-7A0A075B6B0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-7A0A075B6B0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6d-7A0A075B6B0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6d-7A0A075B6B0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.46■□□□□ 0.06
Trav6d-7A0A075B6B0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6d-7A0A075B6B0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-7A0A075B6B0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-7A0A075B6B0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav6d-7A0A075B6B0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.45■□□□□ 0.06
Trav6d-7A0A075B6B0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-7A0A075B6B0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.45■□□□□ 0.06
Trav6d-7A0A075B6B0 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.45■□□□□ 0.06
Trav6d-7A0A075B6B0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-7A0A075B6B0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-7A0A075B6B0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav6d-7A0A075B6B0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6d-7A0A075B6B0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-7A0A075B6B0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-7A0A075B6B0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-7A0A075B6B0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-7A0A075B6B0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-7A0A075B6B0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-7A0A075B6B0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav6d-7A0A075B6B0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-7A0A075B6B0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-7A0A075B6B0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-7A0A075B6B0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-7A0A075B6B0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6d-7A0A075B6B0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-7A0A075B6B0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-7A0A075B6B0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-7A0A075B6B0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav6d-7A0A075B6B0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-7A0A075B6B0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.43■□□□□ 0.06
Trav6d-7A0A075B6B0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Trav6d-7A0A075B6B0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-7A0A075B6B0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-7A0A075B6B0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-7A0A075B6B0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-7A0A075B6B0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6d-7A0A075B6B0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6d-7A0A075B6B0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Trav6d-7A0A075B6B0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6d-7A0A075B6B0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms