Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav17A0A075B655 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav17A0A075B655 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav17A0A075B655 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav17A0A075B655 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav17A0A075B655 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav17A0A075B655 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav17A0A075B655 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav17A0A075B655 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav17A0A075B655 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav17A0A075B655 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Trav17A0A075B655 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.96■□□□□ 0.14
Trav17A0A075B655 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav17A0A075B655 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav17A0A075B655 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav17A0A075B655 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav17A0A075B655 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav17A0A075B655 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav17A0A075B655 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav17A0A075B655 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.94■□□□□ 0.14
Trav17A0A075B655 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav17A0A075B655 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav17A0A075B655 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav17A0A075B655 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav17A0A075B655 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav17A0A075B655 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav17A0A075B655 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav17A0A075B655 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav17A0A075B655 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav17A0A075B655 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.92■□□□□ 0.14
Trav17A0A075B655 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav17A0A075B655 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav17A0A075B655 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav17A0A075B655 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav17A0A075B655 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav17A0A075B655 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav17A0A075B655 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trav17A0A075B655 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav17A0A075B655 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav17A0A075B655 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav17A0A075B655 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav17A0A075B655 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav17A0A075B655 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav17A0A075B655 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav17A0A075B655 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
Trav17A0A075B655 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav17A0A075B655 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav17A0A075B655 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav17A0A075B655 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav17A0A075B655 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Gm10420-201ENSMUST00000121713 882 ntBASIC15.9■□□□□ 0.14
Trav17A0A075B655 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav17A0A075B655 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav17A0A075B655 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav17A0A075B655 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav17A0A075B655 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav17A0A075B655 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav17A0A075B655 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav17A0A075B655 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms