Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trav10A0A075B642 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav10A0A075B642 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Trav10A0A075B642 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.83■□□□□ 0.44
Trav10A0A075B642 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.83■□□□□ 0.44
Trav10A0A075B642 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav10A0A075B642 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav10A0A075B642 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav10A0A075B642 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav10A0A075B642 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav10A0A075B642 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10A0A075B642 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trav10A0A075B642 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10A0A075B642 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.82■□□□□ 0.44
Trav10A0A075B642 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
Trav10A0A075B642 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10A0A075B642 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav10A0A075B642 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10A0A075B642 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10A0A075B642 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10A0A075B642 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10A0A075B642 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10A0A075B642 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trav10A0A075B642 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10A0A075B642 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10A0A075B642 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav10A0A075B642 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10A0A075B642 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10A0A075B642 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10A0A075B642 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10A0A075B642 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10A0A075B642 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10A0A075B642 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10A0A075B642 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10A0A075B642 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10A0A075B642 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10A0A075B642 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Trav10A0A075B642 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav10A0A075B642 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10A0A075B642 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10A0A075B642 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Trav10A0A075B642 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10A0A075B642 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10A0A075B642 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.8■□□□□ 0.44
Trav10A0A075B642 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10A0A075B642 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Trav10A0A075B642 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10A0A075B642 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10A0A075B642 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav10A0A075B642 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.79■□□□□ 0.44
Trav10A0A075B642 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10A0A075B642 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav10A0A075B642 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.79■□□□□ 0.44
Trav10A0A075B642 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.79■□□□□ 0.44
Trav10A0A075B642 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10A0A075B642 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10A0A075B642 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10A0A075B642 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10A0A075B642 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10A0A075B642 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10A0A075B642 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10A0A075B642 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav10A0A075B642 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10A0A075B642 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10A0A075B642 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10A0A075B642 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav10A0A075B642 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav10A0A075B642 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trav10A0A075B642 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10A0A075B642 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10A0A075B642 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10A0A075B642 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10A0A075B642 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav10A0A075B642 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10A0A075B642 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10A0A075B642 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10A0A075B642 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10A0A075B642 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10A0A075B642 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10A0A075B642 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav10A0A075B642 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trav10A0A075B642 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.77■□□□□ 0.43
Trav10A0A075B642 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav10A0A075B642 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav10A0A075B642 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav10A0A075B642 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10A0A075B642 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trav10A0A075B642 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10A0A075B642 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10A0A075B642 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.76■□□□□ 0.43
Trav10A0A075B642 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10A0A075B642 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10A0A075B642 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10A0A075B642 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10A0A075B642 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav10A0A075B642 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.76■□□□□ 0.43
Trav10A0A075B642 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Trav10A0A075B642 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10A0A075B642 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10A0A075B642 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms