Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna6Q9R0W9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna6Q9R0W9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chrna6Q9R0W9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna6Q9R0W9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Chrna6Q9R0W9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna6Q9R0W9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna6Q9R0W9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna6Q9R0W9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna6Q9R0W9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Chrna6Q9R0W9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna6Q9R0W9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna6Q9R0W9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna6Q9R0W9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.52■□□□□ 0.87
Chrna6Q9R0W9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Chrna6Q9R0W9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna6Q9R0W9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Chrna6Q9R0W9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
Chrna6Q9R0W9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna6Q9R0W9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.51■□□□□ 0.87
Chrna6Q9R0W9 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.51■□□□□ 0.87
Chrna6Q9R0W9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna6Q9R0W9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna6Q9R0W9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna6Q9R0W9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna6Q9R0W9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna6Q9R0W9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Mir6236-201ENSMUST00000184437 123 ntBASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Chrna6Q9R0W9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna6Q9R0W9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna6Q9R0W9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna6Q9R0W9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna6Q9R0W9 Gm12821-201ENSMUST00000120022 600 ntBASIC20.49■□□□□ 0.87
Chrna6Q9R0W9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna6Q9R0W9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna6Q9R0W9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chrna6Q9R0W9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Chrna6Q9R0W9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna6Q9R0W9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna6Q9R0W9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna6Q9R0W9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Chrna6Q9R0W9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna6Q9R0W9 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.48■□□□□ 0.87
Chrna6Q9R0W9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.48■□□□□ 0.87
Chrna6Q9R0W9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Chrna6Q9R0W9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Chrna6Q9R0W9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna6Q9R0W9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chrna6Q9R0W9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chrna6Q9R0W9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chrna6Q9R0W9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chrna6Q9R0W9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chrna6Q9R0W9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chrna6Q9R0W9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chrna6Q9R0W9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Chrna6Q9R0W9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chrna6Q9R0W9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chrna6Q9R0W9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chrna6Q9R0W9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Chrna6Q9R0W9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chrna6Q9R0W9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Chrna6Q9R0W9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chrna6Q9R0W9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Chrna6Q9R0W9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chrna6Q9R0W9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Gm43137-201ENSMUST00000198052 594 ntBASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
Chrna6Q9R0W9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms