Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.28■□□□□ 0.2
Smco4Q9JIS3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Smco4Q9JIS3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smco4Q9JIS3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smco4Q9JIS3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smco4Q9JIS3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smco4Q9JIS3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smco4Q9JIS3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smco4Q9JIS3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.27■□□□□ 0.2
Smco4Q9JIS3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smco4Q9JIS3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smco4Q9JIS3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Smco4Q9JIS3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smco4Q9JIS3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
Smco4Q9JIS3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
Smco4Q9JIS3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smco4Q9JIS3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smco4Q9JIS3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smco4Q9JIS3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco4Q9JIS3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco4Q9JIS3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco4Q9JIS3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco4Q9JIS3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco4Q9JIS3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco4Q9JIS3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco4Q9JIS3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.26■□□□□ 0.19
Smco4Q9JIS3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Smco4Q9JIS3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smco4Q9JIS3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smco4Q9JIS3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco4Q9JIS3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smco4Q9JIS3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco4Q9JIS3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco4Q9JIS3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Smco4Q9JIS3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Smco4Q9JIS3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco4Q9JIS3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smco4Q9JIS3 Rarb-207ENSMUST00000225921 2756 ntBASIC16.25■□□□□ 0.19
Smco4Q9JIS3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.24■□□□□ 0.19
Smco4Q9JIS3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smco4Q9JIS3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco4Q9JIS3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco4Q9JIS3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Smco4Q9JIS3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Smco4Q9JIS3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco4Q9JIS3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Smco4Q9JIS3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco4Q9JIS3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smco4Q9JIS3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco4Q9JIS3 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.23■□□□□ 0.19
Smco4Q9JIS3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smco4Q9JIS3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Smco4Q9JIS3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.23■□□□□ 0.19
Smco4Q9JIS3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Smco4Q9JIS3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smco4Q9JIS3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco4Q9JIS3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco4Q9JIS3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco4Q9JIS3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Smco4Q9JIS3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smco4Q9JIS3 Gm24970-201ENSMUST00000175582 82 ntBASIC16.21■□□□□ 0.19
Smco4Q9JIS3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms