Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nkx2-4Q9EQM3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-4Q9EQM3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-4Q9EQM3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-4Q9EQM3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-4Q9EQM3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-4Q9EQM3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Nkx2-4Q9EQM3 Gm13234-201ENSMUST00000120010 747 ntBASIC20.99■□□□□ 0.95
Nkx2-4Q9EQM3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.99■□□□□ 0.95
Nkx2-4Q9EQM3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.99■□□□□ 0.95
Nkx2-4Q9EQM3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-4Q9EQM3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Nkx2-4Q9EQM3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-4Q9EQM3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Nkx2-4Q9EQM3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.98■□□□□ 0.95
Nkx2-4Q9EQM3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-4Q9EQM3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-4Q9EQM3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-4Q9EQM3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.98■□□□□ 0.95
Nkx2-4Q9EQM3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-4Q9EQM3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-4Q9EQM3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-4Q9EQM3 Reep4-203ENSMUST00000226563 1444 ntBASIC20.97■□□□□ 0.95
Nkx2-4Q9EQM3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Nkx2-4Q9EQM3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.97■□□□□ 0.95
Nkx2-4Q9EQM3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-4Q9EQM3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-4Q9EQM3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-4Q9EQM3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-4Q9EQM3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-4Q9EQM3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-4Q9EQM3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Nkx2-4Q9EQM3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-4Q9EQM3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.96■□□□□ 0.95
Nkx2-4Q9EQM3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.96■□□□□ 0.95
Nkx2-4Q9EQM3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Nkx2-4Q9EQM3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.96■□□□□ 0.95
Nkx2-4Q9EQM3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Nkx2-4Q9EQM3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-4Q9EQM3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-4Q9EQM3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-4Q9EQM3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-4Q9EQM3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-4Q9EQM3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-4Q9EQM3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-4Q9EQM3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-4Q9EQM3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-4Q9EQM3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.94■□□□□ 0.94
Nkx2-4Q9EQM3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nkx2-4Q9EQM3 Gm22240-201ENSMUST00000175225 82 ntBASIC20.94■□□□□ 0.94
Nkx2-4Q9EQM3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.94■□□□□ 0.94
Nkx2-4Q9EQM3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-4Q9EQM3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-4Q9EQM3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.94■□□□□ 0.94
Nkx2-4Q9EQM3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-4Q9EQM3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-4Q9EQM3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-4Q9EQM3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-4Q9EQM3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-4Q9EQM3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-4Q9EQM3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-4Q9EQM3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Nkx2-4Q9EQM3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.93■□□□□ 0.94
Nkx2-4Q9EQM3 Gm10252-201ENSMUST00000209541 832 ntBASIC20.93■□□□□ 0.94
Nkx2-4Q9EQM3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-4Q9EQM3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-4Q9EQM3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-4Q9EQM3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Nkx2-4Q9EQM3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.92■□□□□ 0.94
Nkx2-4Q9EQM3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-4Q9EQM3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Nkx2-4Q9EQM3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.92■□□□□ 0.94
Nkx2-4Q9EQM3 Gm7514-201ENSMUST00000209475 934 ntBASIC20.92■□□□□ 0.94
Nkx2-4Q9EQM3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-4Q9EQM3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-4Q9EQM3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-4Q9EQM3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.92■□□□□ 0.94
Nkx2-4Q9EQM3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Nkx2-4Q9EQM3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-4Q9EQM3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-4Q9EQM3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Nkx2-4Q9EQM3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.91■□□□□ 0.94
Nkx2-4Q9EQM3 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.91■□□□□ 0.94
Nkx2-4Q9EQM3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-4Q9EQM3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.91■□□□□ 0.94
Nkx2-4Q9EQM3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Nkx2-4Q9EQM3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx2-4Q9EQM3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-4Q9EQM3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.9■□□□□ 0.94
Nkx2-4Q9EQM3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-4Q9EQM3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-4Q9EQM3 Mir5133-201ENSMUST00000174955 77 ntBASIC20.9■□□□□ 0.94
Nkx2-4Q9EQM3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.9■□□□□ 0.94
Nkx2-4Q9EQM3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-4Q9EQM3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-4Q9EQM3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-4Q9EQM3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-4Q9EQM3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx2-4Q9EQM3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Nkx2-4Q9EQM3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms