Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q9CR55 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q9CR55 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Q9CR55 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Q9CR55 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9CR55 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9CR55 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
Q9CR55 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9CR55 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.57■□□□□ 0.56
Q9CR55 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9CR55 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9CR55 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Q9CR55 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9CR55 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Q9CR55 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9CR55 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CR55 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CR55 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.56■□□□□ 0.56
Q9CR55 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CR55 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Q9CR55 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CR55 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CR55 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CR55 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q9CR55 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Q9CR55 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Q9CR55 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.55■□□□□ 0.56
Q9CR55 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Q9CR55 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CR55 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Q9CR55 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Q9CR55 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CR55 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CR55 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9CR55 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.55■□□□□ 0.56
Q9CR55 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CR55 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CR55 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Q9CR55 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CR55 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CR55 Gm4799-201ENSMUST00000095396 657 ntBASIC18.54■□□□□ 0.56
Q9CR55 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CR55 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CR55 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CR55 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CR55 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CR55 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CR55 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9CR55 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.54■□□□□ 0.56
Q9CR55 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CR55 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CR55 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CR55 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Q9CR55 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Q9CR55 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CR55 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CR55 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CR55 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CR55 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q9CR55 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.52■□□□□ 0.56
Q9CR55 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Q9CR55 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9CR55 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.52■□□□□ 0.56
Q9CR55 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Q9CR55 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q9CR55 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.52■□□□□ 0.55
Q9CR55 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.52■□□□□ 0.55
Q9CR55 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9CR55 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9CR55 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9CR55 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9CR55 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.51■□□□□ 0.55
Q9CR55 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9CR55 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9CR55 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9CR55 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.51■□□□□ 0.55
Q9CR55 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.51■□□□□ 0.55
Q9CR55 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Q9CR55 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Q9CR55 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.51■□□□□ 0.55
Q9CR55 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q9CR55 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Q9CR55 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9CR55 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Q9CR55 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9CR55 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9CR55 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9CR55 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q9CR55 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q9CR55 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.49■□□□□ 0.55
Q9CR55 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Q9CR55 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.49■□□□□ 0.55
Q9CR55 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.49■□□□□ 0.55
Q9CR55 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Q9CR55 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q9CR55 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Q9CR55 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Q9CR55 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Q9CR55 Golph3-205ENSMUST00000228671 2842 ntBASIC18.49■□□□□ 0.55
Q9CR55 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms