Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Raf1Q99N57 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Raf1Q99N57 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.03■□□□□ 0.48
Raf1Q99N57 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Raf1Q99N57 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Raf1Q99N57 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Raf1Q99N57 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Raf1Q99N57 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Raf1Q99N57 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raf1Q99N57 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raf1Q99N57 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raf1Q99N57 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raf1Q99N57 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Raf1Q99N57 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.02■□□□□ 0.48
Raf1Q99N57 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raf1Q99N57 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raf1Q99N57 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Raf1Q99N57 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Raf1Q99N57 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Raf1Q99N57 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raf1Q99N57 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raf1Q99N57 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Raf1Q99N57 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raf1Q99N57 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raf1Q99N57 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raf1Q99N57 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raf1Q99N57 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18■□□□□ 0.47
Raf1Q99N57 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18■□□□□ 0.47
Raf1Q99N57 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18■□□□□ 0.47
Raf1Q99N57 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raf1Q99N57 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raf1Q99N57 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18■□□□□ 0.47
Raf1Q99N57 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raf1Q99N57 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18■□□□□ 0.47
Raf1Q99N57 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Raf1Q99N57 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18■□□□□ 0.47
Raf1Q99N57 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Raf1Q99N57 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Raf1Q99N57 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Raf1Q99N57 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Raf1Q99N57 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.99■□□□□ 0.47
Raf1Q99N57 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Raf1Q99N57 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Raf1Q99N57 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Raf1Q99N57 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.98■□□□□ 0.47
Raf1Q99N57 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raf1Q99N57 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raf1Q99N57 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raf1Q99N57 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raf1Q99N57 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raf1Q99N57 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.98■□□□□ 0.47
Raf1Q99N57 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raf1Q99N57 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raf1Q99N57 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.98■□□□□ 0.47
Raf1Q99N57 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Raf1Q99N57 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raf1Q99N57 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raf1Q99N57 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raf1Q99N57 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raf1Q99N57 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raf1Q99N57 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raf1Q99N57 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Raf1Q99N57 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raf1Q99N57 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raf1Q99N57 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raf1Q99N57 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raf1Q99N57 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raf1Q99N57 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raf1Q99N57 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raf1Q99N57 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raf1Q99N57 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raf1Q99N57 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raf1Q99N57 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Raf1Q99N57 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raf1Q99N57 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.96■□□□□ 0.47
Raf1Q99N57 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raf1Q99N57 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raf1Q99N57 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raf1Q99N57 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Raf1Q99N57 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raf1Q99N57 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raf1Q99N57 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raf1Q99N57 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Raf1Q99N57 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Raf1Q99N57 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.95■□□□□ 0.46
Raf1Q99N57 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Raf1Q99N57 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raf1Q99N57 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raf1Q99N57 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.95■□□□□ 0.46
Raf1Q99N57 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.94■□□□□ 0.46
Raf1Q99N57 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Raf1Q99N57 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raf1Q99N57 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raf1Q99N57 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Raf1Q99N57 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Raf1Q99N57 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
Raf1Q99N57 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.94■□□□□ 0.46
Raf1Q99N57 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.94■□□□□ 0.46
Raf1Q99N57 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raf1Q99N57 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms