Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21■□□□□ 0.95
Pcdhgb1Q91XX8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb1Q91XX8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb1Q91XX8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb1Q91XX8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhgb1Q91XX8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.99■□□□□ 0.95
Pcdhgb1Q91XX8 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.99■□□□□ 0.95
Pcdhgb1Q91XX8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb1Q91XX8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pcdhgb1Q91XX8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhgb1Q91XX8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb1Q91XX8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb1Q91XX8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcdhgb1Q91XX8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb1Q91XX8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhgb1Q91XX8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.98■□□□□ 0.95
Pcdhgb1Q91XX8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb1Q91XX8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb1Q91XX8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb1Q91XX8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb1Q91XX8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb1Q91XX8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcdhgb1Q91XX8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb1Q91XX8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhgb1Q91XX8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb1Q91XX8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb1Q91XX8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb1Q91XX8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb1Q91XX8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhgb1Q91XX8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb1Q91XX8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb1Q91XX8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
Pcdhgb1Q91XX8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb1Q91XX8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb1Q91XX8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhgb1Q91XX8 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.96■□□□□ 0.95
Pcdhgb1Q91XX8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb1Q91XX8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb1Q91XX8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb1Q91XX8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhgb1Q91XX8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb1Q91XX8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.95■□□□□ 0.94
Pcdhgb1Q91XX8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.95■□□□□ 0.94
Pcdhgb1Q91XX8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.95■□□□□ 0.94
Pcdhgb1Q91XX8 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.95■□□□□ 0.94
Pcdhgb1Q91XX8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb1Q91XX8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb1Q91XX8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhgb1Q91XX8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Pcdhgb1Q91XX8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.94■□□□□ 0.94
Pcdhgb1Q91XX8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdhgb1Q91XX8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb1Q91XX8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb1Q91XX8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhgb1Q91XX8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Gm43017-201ENSMUST00000198296 752 ntBASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb1Q91XX8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhgb1Q91XX8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb1Q91XX8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb1Q91XX8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb1Q91XX8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.92■□□□□ 0.94
Pcdhgb1Q91XX8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhgb1Q91XX8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.92■□□□□ 0.94
Pcdhgb1Q91XX8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb1Q91XX8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb1Q91XX8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Pcdhgb1Q91XX8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb1Q91XX8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhgb1Q91XX8 Gm12251-201ENSMUST00000117893 792 ntBASIC20.91■□□□□ 0.94
Pcdhgb1Q91XX8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgb1Q91XX8 Gm8493-201ENSMUST00000196881 489 ntBASIC20.91■□□□□ 0.94
Pcdhgb1Q91XX8 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.91■□□□□ 0.94
Pcdhgb1Q91XX8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhgb1Q91XX8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgb1Q91XX8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgb1Q91XX8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhgb1Q91XX8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgb1Q91XX8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhgb1Q91XX8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhgb1Q91XX8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhgb1Q91XX8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
Pcdhgb1Q91XX8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.89■□□□□ 0.94
Pcdhgb1Q91XX8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms