Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdhgc3Q91XX1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc3Q91XX1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdhgc3Q91XX1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc3Q91XX1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc3Q91XX1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc3Q91XX1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc3Q91XX1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc3Q91XX1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc3Q91XX1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc3Q91XX1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgc3Q91XX1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc3Q91XX1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhgc3Q91XX1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc3Q91XX1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgc3Q91XX1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc3Q91XX1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc3Q91XX1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc3Q91XX1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc3Q91XX1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgc3Q91XX1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdhgc3Q91XX1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.02■□□□□ 0.64
Pcdhgc3Q91XX1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgc3Q91XX1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgc3Q91XX1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgc3Q91XX1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgc3Q91XX1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgc3Q91XX1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgc3Q91XX1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgc3Q91XX1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgc3Q91XX1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgc3Q91XX1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgc3Q91XX1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgc3Q91XX1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhgc3Q91XX1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgc3Q91XX1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgc3Q91XX1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgc3Q91XX1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgc3Q91XX1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgc3Q91XX1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgc3Q91XX1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgc3Q91XX1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgc3Q91XX1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgc3Q91XX1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgc3Q91XX1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgc3Q91XX1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgc3Q91XX1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgc3Q91XX1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgc3Q91XX1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgc3Q91XX1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhgc3Q91XX1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.98■□□□□ 0.63
Pcdhgc3Q91XX1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgc3Q91XX1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhgc3Q91XX1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgc3Q91XX1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgc3Q91XX1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgc3Q91XX1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhgc3Q91XX1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgc3Q91XX1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhgc3Q91XX1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdhgc3Q91XX1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgc3Q91XX1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgc3Q91XX1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgc3Q91XX1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgc3Q91XX1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgc3Q91XX1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Pcdhgc3Q91XX1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgc3Q91XX1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgc3Q91XX1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhgc3Q91XX1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgc3Q91XX1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgc3Q91XX1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgc3Q91XX1 Gm14523-201ENSMUST00000117260 558 ntBASIC18.96■□□□□ 0.63
Pcdhgc3Q91XX1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.96■□□□□ 0.63
Pcdhgc3Q91XX1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhgc3Q91XX1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.96■□□□□ 0.63
Pcdhgc3Q91XX1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgc3Q91XX1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgc3Q91XX1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.96■□□□□ 0.63
Pcdhgc3Q91XX1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhgc3Q91XX1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgc3Q91XX1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgc3Q91XX1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Pcdhgc3Q91XX1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgc3Q91XX1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgc3Q91XX1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhgc3Q91XX1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms