Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lims2Q91XD2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lims2Q91XD2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lims2Q91XD2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Lims2Q91XD2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.9■□□□□ 0.94
Lims2Q91XD2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lims2Q91XD2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Lims2Q91XD2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lims2Q91XD2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lims2Q91XD2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lims2Q91XD2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lims2Q91XD2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lims2Q91XD2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
Lims2Q91XD2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lims2Q91XD2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lims2Q91XD2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lims2Q91XD2 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.89■□□□□ 0.93
Lims2Q91XD2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lims2Q91XD2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lims2Q91XD2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Lims2Q91XD2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Lims2Q91XD2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lims2Q91XD2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lims2Q91XD2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lims2Q91XD2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lims2Q91XD2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lims2Q91XD2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lims2Q91XD2 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.88■□□□□ 0.93
Lims2Q91XD2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Lims2Q91XD2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lims2Q91XD2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lims2Q91XD2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lims2Q91XD2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lims2Q91XD2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lims2Q91XD2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lims2Q91XD2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lims2Q91XD2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lims2Q91XD2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lims2Q91XD2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Lims2Q91XD2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Lims2Q91XD2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lims2Q91XD2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lims2Q91XD2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lims2Q91XD2 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.85■□□□□ 0.93
Lims2Q91XD2 Gm6139-201ENSMUST00000079261 882 ntBASIC20.85■□□□□ 0.93
Lims2Q91XD2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.85■□□□□ 0.93
Lims2Q91XD2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Lims2Q91XD2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lims2Q91XD2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lims2Q91XD2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lims2Q91XD2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Lims2Q91XD2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lims2Q91XD2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lims2Q91XD2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lims2Q91XD2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lims2Q91XD2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lims2Q91XD2 Gm12251-201ENSMUST00000117893 792 ntBASIC20.83■□□□□ 0.93
Lims2Q91XD2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lims2Q91XD2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.83■□□□□ 0.93
Lims2Q91XD2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lims2Q91XD2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lims2Q91XD2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.83■□□□□ 0.92
Lims2Q91XD2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lims2Q91XD2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lims2Q91XD2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Lims2Q91XD2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lims2Q91XD2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lims2Q91XD2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lims2Q91XD2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lims2Q91XD2 Mir7075-201ENSMUST00000184187 82 ntBASIC20.82■□□□□ 0.92
Lims2Q91XD2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Lims2Q91XD2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lims2Q91XD2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lims2Q91XD2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lims2Q91XD2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lims2Q91XD2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.81■□□□□ 0.92
Lims2Q91XD2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Lims2Q91XD2 Spcs1-204ENSMUST00000226782 949 ntBASIC20.81■□□□□ 0.92
Lims2Q91XD2 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.81■□□□□ 0.92
Lims2Q91XD2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Lims2Q91XD2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.81■□□□□ 0.92
Lims2Q91XD2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Lims2Q91XD2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lims2Q91XD2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lims2Q91XD2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Lims2Q91XD2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.8■□□□□ 0.92
Lims2Q91XD2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lims2Q91XD2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lims2Q91XD2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lims2Q91XD2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lims2Q91XD2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lims2Q91XD2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lims2Q91XD2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lims2Q91XD2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lims2Q91XD2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.79■□□□□ 0.92
Lims2Q91XD2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lims2Q91XD2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.79■□□□□ 0.92
Lims2Q91XD2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lims2Q91XD2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Lims2Q91XD2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms