Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.16■□□□□ 0.98
Sh3d19Q91X43 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3d19Q91X43 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Gm12251-201ENSMUST00000117893 792 ntBASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3d19Q91X43 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh3d19Q91X43 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh3d19Q91X43 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh3d19Q91X43 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Sh3d19Q91X43 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Sh3d19Q91X43 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3d19Q91X43 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3d19Q91X43 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
Sh3d19Q91X43 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3d19Q91X43 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Sh3d19Q91X43 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3d19Q91X43 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3d19Q91X43 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3d19Q91X43 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3d19Q91X43 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.13■□□□□ 0.97
Sh3d19Q91X43 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.13■□□□□ 0.97
Sh3d19Q91X43 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3d19Q91X43 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.13■□□□□ 0.97
Sh3d19Q91X43 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.13■□□□□ 0.97
Sh3d19Q91X43 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3d19Q91X43 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.12■□□□□ 0.97
Sh3d19Q91X43 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3d19Q91X43 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3d19Q91X43 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3d19Q91X43 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Sh3d19Q91X43 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3d19Q91X43 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3d19Q91X43 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Sh3d19Q91X43 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3d19Q91X43 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3d19Q91X43 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3d19Q91X43 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3d19Q91X43 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3d19Q91X43 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3d19Q91X43 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3d19Q91X43 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.11■□□□□ 0.97
Sh3d19Q91X43 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3d19Q91X43 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3d19Q91X43 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3d19Q91X43 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3d19Q91X43 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Sh3d19Q91X43 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3d19Q91X43 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3d19Q91X43 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.1■□□□□ 0.97
Sh3d19Q91X43 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.1■□□□□ 0.97
Sh3d19Q91X43 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.1■□□□□ 0.97
Sh3d19Q91X43 Gm43173-201ENSMUST00000202246 593 ntBASIC21.1■□□□□ 0.97
Sh3d19Q91X43 Spcs1-204ENSMUST00000226782 949 ntBASIC21.1■□□□□ 0.97
Sh3d19Q91X43 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3d19Q91X43 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3d19Q91X43 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Gm8493-201ENSMUST00000196881 489 ntBASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Sh3d19Q91X43 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3d19Q91X43 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3d19Q91X43 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.07■□□□□ 0.96
Sh3d19Q91X43 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3d19Q91X43 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3d19Q91X43 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms