Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx41Q91VN6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx41Q91VN6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
Ddx41Q91VN6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.12■■□□□ 1.29
Ddx41Q91VN6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx41Q91VN6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx41Q91VN6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx41Q91VN6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx41Q91VN6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx41Q91VN6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ddx41Q91VN6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx41Q91VN6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx41Q91VN6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx41Q91VN6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx41Q91VN6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.11■■□□□ 1.29
Ddx41Q91VN6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx41Q91VN6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx41Q91VN6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Ddx41Q91VN6 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.11■■□□□ 1.29
Ddx41Q91VN6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx41Q91VN6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx41Q91VN6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx41Q91VN6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx41Q91VN6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx41Q91VN6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx41Q91VN6 Gm7143-201ENSMUST00000222811 859 ntBASIC23.1■■□□□ 1.29
Ddx41Q91VN6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx41Q91VN6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx41Q91VN6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.1■■□□□ 1.29
Ddx41Q91VN6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx41Q91VN6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Ddx41Q91VN6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Ddx41Q91VN6 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.09■■□□□ 1.29
Ddx41Q91VN6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx41Q91VN6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Ddx41Q91VN6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx41Q91VN6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx41Q91VN6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.08■■□□□ 1.29
Ddx41Q91VN6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx41Q91VN6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx41Q91VN6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx41Q91VN6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx41Q91VN6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ddx41Q91VN6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx41Q91VN6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx41Q91VN6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx41Q91VN6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.07■■□□□ 1.28
Ddx41Q91VN6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx41Q91VN6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx41Q91VN6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx41Q91VN6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Ddx41Q91VN6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx41Q91VN6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.06■■□□□ 1.28
Ddx41Q91VN6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx41Q91VN6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx41Q91VN6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Ddx41Q91VN6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx41Q91VN6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx41Q91VN6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx41Q91VN6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC23.04■■□□□ 1.28
Ddx41Q91VN6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Ddx41Q91VN6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx41Q91VN6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.03■■□□□ 1.28
Ddx41Q91VN6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.03■■□□□ 1.28
Ddx41Q91VN6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx41Q91VN6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx41Q91VN6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ddx41Q91VN6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.03■■□□□ 1.28
Ddx41Q91VN6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ddx41Q91VN6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx41Q91VN6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx41Q91VN6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.02■■□□□ 1.28
Ddx41Q91VN6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC23.02■■□□□ 1.28
Ddx41Q91VN6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx41Q91VN6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ddx41Q91VN6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
Ddx41Q91VN6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Ddx41Q91VN6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx41Q91VN6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ddx41Q91VN6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ddx41Q91VN6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ddx41Q91VN6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Ddx41Q91VN6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Ddx41Q91VN6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Ddx41Q91VN6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ddx41Q91VN6 Gm43137-201ENSMUST00000198052 594 ntBASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms