Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc65Q8VHI7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc65Q8VHI7 Gm45102-201ENSMUST00000207427 857 ntBASIC21.3■■□□□ 1
Ccdc65Q8VHI7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc65Q8VHI7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc65Q8VHI7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc65Q8VHI7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc65Q8VHI7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ccdc65Q8VHI7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc65Q8VHI7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc65Q8VHI7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc65Q8VHI7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ccdc65Q8VHI7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc65Q8VHI7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc65Q8VHI7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc65Q8VHI7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc65Q8VHI7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc65Q8VHI7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ccdc65Q8VHI7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ccdc65Q8VHI7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc65Q8VHI7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ccdc65Q8VHI7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc65Q8VHI7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.28■■□□□ 1
Ccdc65Q8VHI7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc65Q8VHI7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc65Q8VHI7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc65Q8VHI7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc65Q8VHI7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc65Q8VHI7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc65Q8VHI7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ccdc65Q8VHI7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.27■■□□□ 1
Ccdc65Q8VHI7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc65Q8VHI7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc65Q8VHI7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc65Q8VHI7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc65Q8VHI7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ccdc65Q8VHI7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc65Q8VHI7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.27■□□□□ 0.99
Ccdc65Q8VHI7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc65Q8VHI7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc65Q8VHI7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc65Q8VHI7 Golph3-202ENSMUST00000226517 2359 ntBASIC21.25■□□□□ 0.99
Ccdc65Q8VHI7 Gm14117-201ENSMUST00000122417 843 ntBASIC21.25■□□□□ 0.99
Ccdc65Q8VHI7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc65Q8VHI7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc65Q8VHI7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc65Q8VHI7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc65Q8VHI7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc65Q8VHI7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc65Q8VHI7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc65Q8VHI7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.24■□□□□ 0.99
Ccdc65Q8VHI7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.24■□□□□ 0.99
Ccdc65Q8VHI7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc65Q8VHI7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc65Q8VHI7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc65Q8VHI7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc65Q8VHI7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc65Q8VHI7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc65Q8VHI7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc65Q8VHI7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc65Q8VHI7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc65Q8VHI7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.23■□□□□ 0.99
Ccdc65Q8VHI7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc65Q8VHI7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc65Q8VHI7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ccdc65Q8VHI7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc65Q8VHI7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc65Q8VHI7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc65Q8VHI7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc65Q8VHI7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.22■□□□□ 0.99
Ccdc65Q8VHI7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc65Q8VHI7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc65Q8VHI7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc65Q8VHI7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc65Q8VHI7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.21■□□□□ 0.99
Ccdc65Q8VHI7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc65Q8VHI7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ccdc65Q8VHI7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ccdc65Q8VHI7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.21■□□□□ 0.99
Ccdc65Q8VHI7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc65Q8VHI7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccdc65Q8VHI7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc65Q8VHI7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc65Q8VHI7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.2■□□□□ 0.99
Ccdc65Q8VHI7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc65Q8VHI7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc65Q8VHI7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc65Q8VHI7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc65Q8VHI7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc65Q8VHI7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc65Q8VHI7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc65Q8VHI7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc65Q8VHI7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc65Q8VHI7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc65Q8VHI7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.19■□□□□ 0.98
Ccdc65Q8VHI7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc65Q8VHI7 Gm7143-201ENSMUST00000222811 859 ntBASIC21.19■□□□□ 0.98
Ccdc65Q8VHI7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc65Q8VHI7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc65Q8VHI7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms