Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Upb1Q8VC97 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Upb1Q8VC97 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Upb1Q8VC97 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Upb1Q8VC97 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.02■■□□□ 1.12
Upb1Q8VC97 Wdr70-203ENSMUST00000227371 1130 ntBASIC22.02■■□□□ 1.12
Upb1Q8VC97 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Upb1Q8VC97 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Upb1Q8VC97 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Upb1Q8VC97 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Upb1Q8VC97 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Upb1Q8VC97 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Upb1Q8VC97 Mir6236-201ENSMUST00000184437 123 ntBASIC22.01■■□□□ 1.11
Upb1Q8VC97 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Upb1Q8VC97 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Upb1Q8VC97 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Upb1Q8VC97 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Upb1Q8VC97 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Upb1Q8VC97 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Upb1Q8VC97 Gm12504-201ENSMUST00000120860 2231 ntBASIC22■■□□□ 1.11
Upb1Q8VC97 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Upb1Q8VC97 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Upb1Q8VC97 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22■■□□□ 1.11
Upb1Q8VC97 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Upb1Q8VC97 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22■■□□□ 1.11
Upb1Q8VC97 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22■■□□□ 1.11
Upb1Q8VC97 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Upb1Q8VC97 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Upb1Q8VC97 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.99■■□□□ 1.11
Upb1Q8VC97 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
Upb1Q8VC97 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Upb1Q8VC97 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Upb1Q8VC97 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Upb1Q8VC97 Spcs1-204ENSMUST00000226782 949 ntBASIC21.99■■□□□ 1.11
Upb1Q8VC97 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Upb1Q8VC97 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Upb1Q8VC97 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Upb1Q8VC97 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Upb1Q8VC97 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Upb1Q8VC97 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
Upb1Q8VC97 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.98■■□□□ 1.11
Upb1Q8VC97 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Upb1Q8VC97 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Upb1Q8VC97 Gm12251-201ENSMUST00000117893 792 ntBASIC21.98■■□□□ 1.11
Upb1Q8VC97 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.98■■□□□ 1.11
Upb1Q8VC97 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
Upb1Q8VC97 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Upb1Q8VC97 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Upb1Q8VC97 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Upb1Q8VC97 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.98■■□□□ 1.11
Upb1Q8VC97 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Upb1Q8VC97 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Upb1Q8VC97 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Upb1Q8VC97 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Upb1Q8VC97 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Upb1Q8VC97 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Upb1Q8VC97 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Upb1Q8VC97 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.97■■□□□ 1.11
Upb1Q8VC97 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Upb1Q8VC97 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Upb1Q8VC97 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Upb1Q8VC97 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Upb1Q8VC97 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Upb1Q8VC97 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Upb1Q8VC97 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Upb1Q8VC97 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Upb1Q8VC97 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.96■■□□□ 1.11
Upb1Q8VC97 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Upb1Q8VC97 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Upb1Q8VC97 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.96■■□□□ 1.11
Upb1Q8VC97 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.96■■□□□ 1.11
Upb1Q8VC97 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Upb1Q8VC97 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Upb1Q8VC97 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Upb1Q8VC97 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Upb1Q8VC97 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Upb1Q8VC97 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Upb1Q8VC97 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Upb1Q8VC97 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Upb1Q8VC97 Gm43017-201ENSMUST00000198296 752 ntBASIC21.95■■□□□ 1.1
Upb1Q8VC97 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Upb1Q8VC97 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Upb1Q8VC97 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Upb1Q8VC97 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Upb1Q8VC97 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Upb1Q8VC97 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Upb1Q8VC97 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Upb1Q8VC97 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Upb1Q8VC97 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Upb1Q8VC97 Gm43173-201ENSMUST00000202246 593 ntBASIC21.94■■□□□ 1.1
Upb1Q8VC97 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.94■■□□□ 1.1
Upb1Q8VC97 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Upb1Q8VC97 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Upb1Q8VC97 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Upb1Q8VC97 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Upb1Q8VC97 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Upb1Q8VC97 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Upb1Q8VC97 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Upb1Q8VC97 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Upb1Q8VC97 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms