Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp28Q8CGV8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mmp28Q8CGV8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Mmp28Q8CGV8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Mir6538-201ENSMUST00000183713 110 ntBASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp28Q8CGV8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp28Q8CGV8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp28Q8CGV8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp28Q8CGV8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp28Q8CGV8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.09■□□□□ 0.33
Mmp28Q8CGV8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp28Q8CGV8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Mmp28Q8CGV8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Mmp28Q8CGV8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Mmp28Q8CGV8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Mmp28Q8CGV8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms