Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Alx1Q8C8B0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Alx1Q8C8B0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Alx1Q8C8B0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Alx1Q8C8B0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Alx1Q8C8B0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Alx1Q8C8B0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.81■■□□□ 1.4
Alx1Q8C8B0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Alx1Q8C8B0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.81■■□□□ 1.4
Alx1Q8C8B0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.81■■□□□ 1.4
Alx1Q8C8B0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
Alx1Q8C8B0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Alx1Q8C8B0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Alx1Q8C8B0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Alx1Q8C8B0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Alx1Q8C8B0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Alx1Q8C8B0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Alx1Q8C8B0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Alx1Q8C8B0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Alx1Q8C8B0 Mir6236-201ENSMUST00000184437 123 ntBASIC23.8■■□□□ 1.4
Alx1Q8C8B0 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.8■■□□□ 1.4
Alx1Q8C8B0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Alx1Q8C8B0 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.79■■□□□ 1.4
Alx1Q8C8B0 Gm27454-201ENSMUST00000185090 204 ntBASIC23.79■■□□□ 1.4
Alx1Q8C8B0 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.79■■□□□ 1.4
Alx1Q8C8B0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Alx1Q8C8B0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Alx1Q8C8B0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Alx1Q8C8B0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Alx1Q8C8B0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Alx1Q8C8B0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.78■■□□□ 1.4
Alx1Q8C8B0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Alx1Q8C8B0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Alx1Q8C8B0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Alx1Q8C8B0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
Alx1Q8C8B0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Alx1Q8C8B0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Alx1Q8C8B0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Alx1Q8C8B0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Alx1Q8C8B0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Alx1Q8C8B0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Alx1Q8C8B0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Alx1Q8C8B0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Alx1Q8C8B0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.77■■□□□ 1.4
Alx1Q8C8B0 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.77■■□□□ 1.4
Alx1Q8C8B0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Alx1Q8C8B0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Alx1Q8C8B0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Alx1Q8C8B0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Alx1Q8C8B0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Alx1Q8C8B0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Alx1Q8C8B0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Alx1Q8C8B0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.76■■□□□ 1.39
Alx1Q8C8B0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Alx1Q8C8B0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.76■■□□□ 1.39
Alx1Q8C8B0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Alx1Q8C8B0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Alx1Q8C8B0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Alx1Q8C8B0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Alx1Q8C8B0 Gm43137-201ENSMUST00000198052 594 ntBASIC23.75■■□□□ 1.39
Alx1Q8C8B0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Alx1Q8C8B0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Alx1Q8C8B0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Alx1Q8C8B0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Alx1Q8C8B0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Alx1Q8C8B0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.74■■□□□ 1.39
Alx1Q8C8B0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Alx1Q8C8B0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.74■■□□□ 1.39
Alx1Q8C8B0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Alx1Q8C8B0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Alx1Q8C8B0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Alx1Q8C8B0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Alx1Q8C8B0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Alx1Q8C8B0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Alx1Q8C8B0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Alx1Q8C8B0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Alx1Q8C8B0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Alx1Q8C8B0 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Alx1Q8C8B0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Alx1Q8C8B0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Alx1Q8C8B0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Alx1Q8C8B0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Alx1Q8C8B0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.72■■□□□ 1.39
Alx1Q8C8B0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Alx1Q8C8B0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Alx1Q8C8B0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Alx1Q8C8B0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Alx1Q8C8B0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Alx1Q8C8B0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Alx1Q8C8B0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
Alx1Q8C8B0 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.71■■□□□ 1.39
Alx1Q8C8B0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.71■■□□□ 1.39
Alx1Q8C8B0 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.71■■□□□ 1.39
Alx1Q8C8B0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Alx1Q8C8B0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Alx1Q8C8B0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Alx1Q8C8B0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Alx1Q8C8B0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Alx1Q8C8B0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Alx1Q8C8B0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms