Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.25■□□□□ 0.83
Cpsf7Q8BTV2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf7Q8BTV2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf7Q8BTV2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf7Q8BTV2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf7Q8BTV2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf7Q8BTV2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf7Q8BTV2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpsf7Q8BTV2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.24■□□□□ 0.83
Cpsf7Q8BTV2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cpsf7Q8BTV2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cpsf7Q8BTV2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf7Q8BTV2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf7Q8BTV2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf7Q8BTV2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf7Q8BTV2 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.23■□□□□ 0.83
Cpsf7Q8BTV2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf7Q8BTV2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf7Q8BTV2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf7Q8BTV2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Cpsf7Q8BTV2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf7Q8BTV2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf7Q8BTV2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpsf7Q8BTV2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf7Q8BTV2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf7Q8BTV2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf7Q8BTV2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf7Q8BTV2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cpsf7Q8BTV2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cpsf7Q8BTV2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cpsf7Q8BTV2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf7Q8BTV2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf7Q8BTV2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cpsf7Q8BTV2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf7Q8BTV2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf7Q8BTV2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf7Q8BTV2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf7Q8BTV2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpsf7Q8BTV2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Cpsf7Q8BTV2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf7Q8BTV2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cpsf7Q8BTV2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf7Q8BTV2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf7Q8BTV2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf7Q8BTV2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf7Q8BTV2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cpsf7Q8BTV2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cpsf7Q8BTV2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf7Q8BTV2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf7Q8BTV2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf7Q8BTV2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf7Q8BTV2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cpsf7Q8BTV2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.19■□□□□ 0.82
Cpsf7Q8BTV2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cpsf7Q8BTV2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf7Q8BTV2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpsf7Q8BTV2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cpsf7Q8BTV2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.19■□□□□ 0.82
Cpsf7Q8BTV2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf7Q8BTV2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Cpsf7Q8BTV2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cpsf7Q8BTV2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf7Q8BTV2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf7Q8BTV2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpsf7Q8BTV2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cpsf7Q8BTV2 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.18■□□□□ 0.82
Cpsf7Q8BTV2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpsf7Q8BTV2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cpsf7Q8BTV2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpsf7Q8BTV2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpsf7Q8BTV2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.17■□□□□ 0.82
Cpsf7Q8BTV2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpsf7Q8BTV2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpsf7Q8BTV2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpsf7Q8BTV2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpsf7Q8BTV2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.16■□□□□ 0.82
Cpsf7Q8BTV2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.16■□□□□ 0.82
Cpsf7Q8BTV2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.16■□□□□ 0.82
Cpsf7Q8BTV2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf7Q8BTV2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf7Q8BTV2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf7Q8BTV2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpsf7Q8BTV2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.15■□□□□ 0.82
Cpsf7Q8BTV2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf7Q8BTV2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf7Q8BTV2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf7Q8BTV2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf7Q8BTV2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf7Q8BTV2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf7Q8BTV2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Cpsf7Q8BTV2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf7Q8BTV2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cpsf7Q8BTV2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf7Q8BTV2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpsf7Q8BTV2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cpsf7Q8BTV2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.14■□□□□ 0.81
Cpsf7Q8BTV2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpsf7Q8BTV2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpsf7Q8BTV2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpsf7Q8BTV2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms