Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.22■■□□□ 1.31
Trnp1Q80ZI1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC23.22■■□□□ 1.31
Trnp1Q80ZI1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trnp1Q80ZI1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trnp1Q80ZI1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.21■■□□□ 1.31
Trnp1Q80ZI1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Trnp1Q80ZI1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC23.21■■□□□ 1.31
Trnp1Q80ZI1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trnp1Q80ZI1 Gm9988-201ENSMUST00000069786 435 ntBASIC23.21■■□□□ 1.31
Trnp1Q80ZI1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trnp1Q80ZI1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Trnp1Q80ZI1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trnp1Q80ZI1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Trnp1Q80ZI1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trnp1Q80ZI1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Trnp1Q80ZI1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trnp1Q80ZI1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.19■■□□□ 1.3
Trnp1Q80ZI1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Trnp1Q80ZI1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.19■■□□□ 1.3
Trnp1Q80ZI1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trnp1Q80ZI1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trnp1Q80ZI1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.19■■□□□ 1.3
Trnp1Q80ZI1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trnp1Q80ZI1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trnp1Q80ZI1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trnp1Q80ZI1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trnp1Q80ZI1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23.18■■□□□ 1.3
Trnp1Q80ZI1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC23.18■■□□□ 1.3
Trnp1Q80ZI1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trnp1Q80ZI1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trnp1Q80ZI1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trnp1Q80ZI1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trnp1Q80ZI1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trnp1Q80ZI1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trnp1Q80ZI1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trnp1Q80ZI1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trnp1Q80ZI1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trnp1Q80ZI1 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.17■■□□□ 1.3
Trnp1Q80ZI1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trnp1Q80ZI1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.17■■□□□ 1.3
Trnp1Q80ZI1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
Trnp1Q80ZI1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trnp1Q80ZI1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trnp1Q80ZI1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trnp1Q80ZI1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trnp1Q80ZI1 Gm13234-201ENSMUST00000120010 747 ntBASIC23.16■■□□□ 1.3
Trnp1Q80ZI1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trnp1Q80ZI1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC23.16■■□□□ 1.3
Trnp1Q80ZI1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23.16■■□□□ 1.3
Trnp1Q80ZI1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Trnp1Q80ZI1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Trnp1Q80ZI1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trnp1Q80ZI1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trnp1Q80ZI1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trnp1Q80ZI1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trnp1Q80ZI1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trnp1Q80ZI1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trnp1Q80ZI1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trnp1Q80ZI1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trnp1Q80ZI1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trnp1Q80ZI1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trnp1Q80ZI1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Trnp1Q80ZI1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.14■■□□□ 1.29
Trnp1Q80ZI1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trnp1Q80ZI1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trnp1Q80ZI1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.13■■□□□ 1.29
Trnp1Q80ZI1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Trnp1Q80ZI1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trnp1Q80ZI1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC23.13■■□□□ 1.29
Trnp1Q80ZI1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trnp1Q80ZI1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trnp1Q80ZI1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Trnp1Q80ZI1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trnp1Q80ZI1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.12■■□□□ 1.29
Trnp1Q80ZI1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Trnp1Q80ZI1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Trnp1Q80ZI1 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.11■■□□□ 1.29
Trnp1Q80ZI1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trnp1Q80ZI1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trnp1Q80ZI1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trnp1Q80ZI1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Trnp1Q80ZI1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trnp1Q80ZI1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.11■■□□□ 1.29
Trnp1Q80ZI1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trnp1Q80ZI1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
Trnp1Q80ZI1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Trnp1Q80ZI1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.11■■□□□ 1.29
Trnp1Q80ZI1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trnp1Q80ZI1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trnp1Q80ZI1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trnp1Q80ZI1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC23.1■■□□□ 1.29
Trnp1Q80ZI1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Trnp1Q80ZI1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.1■■□□□ 1.29
Trnp1Q80ZI1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC23.1■■□□□ 1.29
Trnp1Q80ZI1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Trnp1Q80ZI1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trnp1Q80ZI1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trnp1Q80ZI1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Trnp1Q80ZI1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trnp1Q80ZI1 Nespas-201ENSMUST00000143738 1083 ntBASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms