Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lsm8Q6ZWM4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lsm8Q6ZWM4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Lsm8Q6ZWM4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lsm8Q6ZWM4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lsm8Q6ZWM4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lsm8Q6ZWM4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lsm8Q6ZWM4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Lsm8Q6ZWM4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Lsm8Q6ZWM4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lsm8Q6ZWM4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lsm8Q6ZWM4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.28■■□□□ 1
Lsm8Q6ZWM4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsm8Q6ZWM4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsm8Q6ZWM4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lsm8Q6ZWM4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsm8Q6ZWM4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lsm8Q6ZWM4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Lsm8Q6ZWM4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lsm8Q6ZWM4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Lsm8Q6ZWM4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsm8Q6ZWM4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.26■□□□□ 0.99
Lsm8Q6ZWM4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.26■□□□□ 0.99
Lsm8Q6ZWM4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Lsm8Q6ZWM4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsm8Q6ZWM4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lsm8Q6ZWM4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm8Q6ZWM4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm8Q6ZWM4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm8Q6ZWM4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm8Q6ZWM4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.25■□□□□ 0.99
Lsm8Q6ZWM4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm8Q6ZWM4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm8Q6ZWM4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm8Q6ZWM4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Lsm8Q6ZWM4 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.25■□□□□ 0.99
Lsm8Q6ZWM4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lsm8Q6ZWM4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lsm8Q6ZWM4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lsm8Q6ZWM4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsm8Q6ZWM4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsm8Q6ZWM4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lsm8Q6ZWM4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.24■□□□□ 0.99
Lsm8Q6ZWM4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.24■□□□□ 0.99
Lsm8Q6ZWM4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsm8Q6ZWM4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsm8Q6ZWM4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lsm8Q6ZWM4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm8Q6ZWM4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm8Q6ZWM4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm8Q6ZWM4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Lsm8Q6ZWM4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.23■□□□□ 0.99
Lsm8Q6ZWM4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm8Q6ZWM4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm8Q6ZWM4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm8Q6ZWM4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm8Q6ZWM4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm8Q6ZWM4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm8Q6ZWM4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Lsm8Q6ZWM4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsm8Q6ZWM4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.22■□□□□ 0.99
Lsm8Q6ZWM4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsm8Q6ZWM4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsm8Q6ZWM4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Lsm8Q6ZWM4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Lsm8Q6ZWM4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Lsm8Q6ZWM4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm8Q6ZWM4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm8Q6ZWM4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm8Q6ZWM4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.21■□□□□ 0.99
Lsm8Q6ZWM4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm8Q6ZWM4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Lsm8Q6ZWM4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.21■□□□□ 0.99
Lsm8Q6ZWM4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm8Q6ZWM4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm8Q6ZWM4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm8Q6ZWM4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm8Q6ZWM4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm8Q6ZWM4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm8Q6ZWM4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm8Q6ZWM4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm8Q6ZWM4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm8Q6ZWM4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm8Q6ZWM4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm8Q6ZWM4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm8Q6ZWM4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lsm8Q6ZWM4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms