Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Snx6Q6P8X1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Snx6Q6P8X1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx6Q6P8X1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Snx6Q6P8X1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Snx6Q6P8X1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx6Q6P8X1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx6Q6P8X1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Snx6Q6P8X1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx6Q6P8X1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx6Q6P8X1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Snx6Q6P8X1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Snx6Q6P8X1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Snx6Q6P8X1 Gm7417-201ENSMUST00000192950 473 ntBASIC19.25■□□□□ 0.67
Snx6Q6P8X1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx6Q6P8X1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Snx6Q6P8X1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx6Q6P8X1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Snx6Q6P8X1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx6Q6P8X1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Snx6Q6P8X1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx6Q6P8X1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Snx6Q6P8X1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Snx6Q6P8X1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Snx6Q6P8X1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx6Q6P8X1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Snx6Q6P8X1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.24■□□□□ 0.67
Snx6Q6P8X1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.24■□□□□ 0.67
Snx6Q6P8X1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx6Q6P8X1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Snx6Q6P8X1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Snx6Q6P8X1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Snx6Q6P8X1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Snx6Q6P8X1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snx6Q6P8X1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx6Q6P8X1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx6Q6P8X1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snx6Q6P8X1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snx6Q6P8X1 Gm7143-201ENSMUST00000222811 859 ntBASIC19.23■□□□□ 0.67
Snx6Q6P8X1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx6Q6P8X1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Snx6Q6P8X1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx6Q6P8X1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx6Q6P8X1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Snx6Q6P8X1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Snx6Q6P8X1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Snx6Q6P8X1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Snx6Q6P8X1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx6Q6P8X1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx6Q6P8X1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx6Q6P8X1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.21■□□□□ 0.67
Snx6Q6P8X1 Etf1-202ENSMUST00000180351 108 ntBASIC19.21■□□□□ 0.67
Snx6Q6P8X1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.21■□□□□ 0.67
Snx6Q6P8X1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Snx6Q6P8X1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx6Q6P8X1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx6Q6P8X1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.2■□□□□ 0.66
Snx6Q6P8X1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Snx6Q6P8X1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Snx6Q6P8X1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Snx6Q6P8X1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Snx6Q6P8X1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx6Q6P8X1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx6Q6P8X1 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.2■□□□□ 0.66
Snx6Q6P8X1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Snx6Q6P8X1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx6Q6P8X1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Snx6Q6P8X1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx6Q6P8X1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Snx6Q6P8X1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx6Q6P8X1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Snx6Q6P8X1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx6Q6P8X1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx6Q6P8X1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx6Q6P8X1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.19■□□□□ 0.66
Snx6Q6P8X1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx6Q6P8X1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx6Q6P8X1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx6Q6P8X1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx6Q6P8X1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx6Q6P8X1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx6Q6P8X1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Snx6Q6P8X1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx6Q6P8X1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx6Q6P8X1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx6Q6P8X1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms