Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Scube3Q66PY1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scube3Q66PY1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Scube3Q66PY1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scube3Q66PY1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scube3Q66PY1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Scube3Q66PY1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scube3Q66PY1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scube3Q66PY1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Scube3Q66PY1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scube3Q66PY1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scube3Q66PY1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scube3Q66PY1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
Scube3Q66PY1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scube3Q66PY1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.23■□□□□ 0.99
Scube3Q66PY1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scube3Q66PY1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scube3Q66PY1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scube3Q66PY1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scube3Q66PY1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Scube3Q66PY1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scube3Q66PY1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.22■□□□□ 0.99
Scube3Q66PY1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scube3Q66PY1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scube3Q66PY1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scube3Q66PY1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Scube3Q66PY1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scube3Q66PY1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scube3Q66PY1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scube3Q66PY1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scube3Q66PY1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scube3Q66PY1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Scube3Q66PY1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scube3Q66PY1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scube3Q66PY1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Scube3Q66PY1 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.2■□□□□ 0.98
Scube3Q66PY1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scube3Q66PY1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scube3Q66PY1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Scube3Q66PY1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scube3Q66PY1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scube3Q66PY1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scube3Q66PY1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Scube3Q66PY1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scube3Q66PY1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scube3Q66PY1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Scube3Q66PY1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scube3Q66PY1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scube3Q66PY1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Scube3Q66PY1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scube3Q66PY1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Scube3Q66PY1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Scube3Q66PY1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scube3Q66PY1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Scube3Q66PY1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Scube3Q66PY1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scube3Q66PY1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scube3Q66PY1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Scube3Q66PY1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.18■□□□□ 0.98
Scube3Q66PY1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scube3Q66PY1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Scube3Q66PY1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scube3Q66PY1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scube3Q66PY1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.18■□□□□ 0.98
Scube3Q66PY1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scube3Q66PY1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Scube3Q66PY1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Scube3Q66PY1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.17■□□□□ 0.98
Scube3Q66PY1 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.17■□□□□ 0.98
Scube3Q66PY1 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.17■□□□□ 0.98
Scube3Q66PY1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scube3Q66PY1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scube3Q66PY1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scube3Q66PY1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scube3Q66PY1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scube3Q66PY1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Scube3Q66PY1 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.16■□□□□ 0.98
Scube3Q66PY1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Scube3Q66PY1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scube3Q66PY1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scube3Q66PY1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scube3Q66PY1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scube3Q66PY1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scube3Q66PY1 Gm12821-201ENSMUST00000120022 600 ntBASIC21.16■□□□□ 0.98
Scube3Q66PY1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scube3Q66PY1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Scube3Q66PY1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scube3Q66PY1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scube3Q66PY1 Gm27454-201ENSMUST00000185090 204 ntBASIC21.15■□□□□ 0.98
Scube3Q66PY1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.15■□□□□ 0.98
Scube3Q66PY1 Serp2-204ENSMUST00000228055 705 ntBASIC21.15■□□□□ 0.98
Scube3Q66PY1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scube3Q66PY1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scube3Q66PY1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Scube3Q66PY1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scube3Q66PY1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scube3Q66PY1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Scube3Q66PY1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Scube3Q66PY1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scube3Q66PY1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms