Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clns1aQ61189 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clns1aQ61189 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clns1aQ61189 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clns1aQ61189 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clns1aQ61189 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Clns1aQ61189 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clns1aQ61189 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clns1aQ61189 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clns1aQ61189 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clns1aQ61189 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clns1aQ61189 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Clns1aQ61189 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.26■□□□□ 0.35
Clns1aQ61189 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clns1aQ61189 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clns1aQ61189 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clns1aQ61189 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clns1aQ61189 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Clns1aQ61189 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clns1aQ61189 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clns1aQ61189 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clns1aQ61189 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clns1aQ61189 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.25■□□□□ 0.35
Clns1aQ61189 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clns1aQ61189 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clns1aQ61189 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
Clns1aQ61189 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clns1aQ61189 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.25■□□□□ 0.35
Clns1aQ61189 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.24■□□□□ 0.35
Clns1aQ61189 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clns1aQ61189 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clns1aQ61189 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clns1aQ61189 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clns1aQ61189 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clns1aQ61189 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clns1aQ61189 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clns1aQ61189 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clns1aQ61189 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.23■□□□□ 0.35
Clns1aQ61189 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clns1aQ61189 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clns1aQ61189 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clns1aQ61189 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clns1aQ61189 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clns1aQ61189 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clns1aQ61189 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clns1aQ61189 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clns1aQ61189 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Clns1aQ61189 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clns1aQ61189 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clns1aQ61189 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clns1aQ61189 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clns1aQ61189 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clns1aQ61189 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clns1aQ61189 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clns1aQ61189 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clns1aQ61189 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clns1aQ61189 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Clns1aQ61189 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.21■□□□□ 0.35
Clns1aQ61189 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clns1aQ61189 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clns1aQ61189 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.2■□□□□ 0.34
Clns1aQ61189 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clns1aQ61189 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clns1aQ61189 Gm16437-201ENSMUST00000025669 507 ntBASIC17.2■□□□□ 0.34
Clns1aQ61189 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clns1aQ61189 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clns1aQ61189 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clns1aQ61189 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clns1aQ61189 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clns1aQ61189 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clns1aQ61189 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clns1aQ61189 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.2■□□□□ 0.34
Clns1aQ61189 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clns1aQ61189 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Clns1aQ61189 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clns1aQ61189 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clns1aQ61189 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clns1aQ61189 Scarna2-201ENSMUST00000157560 414 ntBASIC17.19■□□□□ 0.34
Clns1aQ61189 Gm9806-201ENSMUST00000051080 552 ntBASIC17.19■□□□□ 0.34
Clns1aQ61189 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clns1aQ61189 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clns1aQ61189 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.19■□□□□ 0.34
Clns1aQ61189 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clns1aQ61189 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.19■□□□□ 0.34
Clns1aQ61189 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clns1aQ61189 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clns1aQ61189 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clns1aQ61189 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clns1aQ61189 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clns1aQ61189 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Clns1aQ61189 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Clns1aQ61189 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clns1aQ61189 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clns1aQ61189 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clns1aQ61189 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clns1aQ61189 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms