Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-3Q5R1I1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-3Q5R1I1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav7d-3Q5R1I1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-3Q5R1I1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-3Q5R1I1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav7d-3Q5R1I1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Gm10399-202ENSMUST00000202768 748 ntBASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav7d-3Q5R1I1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-3Q5R1I1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-3Q5R1I1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-3Q5R1I1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-3Q5R1I1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Trav7d-3Q5R1I1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-3Q5R1I1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav7d-3Q5R1I1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.77□□□□□ -0.04
Trav7d-3Q5R1I1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-3Q5R1I1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-3Q5R1I1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav7d-3Q5R1I1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-3Q5R1I1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav7d-3Q5R1I1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-3Q5R1I1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav7d-3Q5R1I1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav7d-3Q5R1I1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav7d-3Q5R1I1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav7d-3Q5R1I1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-3Q5R1I1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Trav7d-3Q5R1I1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-3Q5R1I1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-3Q5R1I1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav7d-3Q5R1I1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav7d-3Q5R1I1 Gm10232-201ENSMUST00000089221 720 ntBASIC14.73□□□□□ -0.05
Trav7d-3Q5R1I1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-3Q5R1I1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-3Q5R1I1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav7d-3Q5R1I1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav7d-3Q5R1I1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms