Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.9■■□□□ 1.1
R3hdm4Q4VBF2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
R3hdm4Q4VBF2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3hdm4Q4VBF2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3hdm4Q4VBF2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3hdm4Q4VBF2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
R3hdm4Q4VBF2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
R3hdm4Q4VBF2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.9■■□□□ 1.1
R3hdm4Q4VBF2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
R3hdm4Q4VBF2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
R3hdm4Q4VBF2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
R3hdm4Q4VBF2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
R3hdm4Q4VBF2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
R3hdm4Q4VBF2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
R3hdm4Q4VBF2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
R3hdm4Q4VBF2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
R3hdm4Q4VBF2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
R3hdm4Q4VBF2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
R3hdm4Q4VBF2 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.88■■□□□ 1.09
R3hdm4Q4VBF2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
R3hdm4Q4VBF2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.88■■□□□ 1.09
R3hdm4Q4VBF2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
R3hdm4Q4VBF2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
R3hdm4Q4VBF2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
R3hdm4Q4VBF2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
R3hdm4Q4VBF2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
R3hdm4Q4VBF2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.88■■□□□ 1.09
R3hdm4Q4VBF2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
R3hdm4Q4VBF2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
R3hdm4Q4VBF2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
R3hdm4Q4VBF2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.87■■□□□ 1.09
R3hdm4Q4VBF2 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.87■■□□□ 1.09
R3hdm4Q4VBF2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.87■■□□□ 1.09
R3hdm4Q4VBF2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.87■■□□□ 1.09
R3hdm4Q4VBF2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
R3hdm4Q4VBF2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
R3hdm4Q4VBF2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
R3hdm4Q4VBF2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
R3hdm4Q4VBF2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.85■■□□□ 1.09
R3hdm4Q4VBF2 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.85■■□□□ 1.09
R3hdm4Q4VBF2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.85■■□□□ 1.09
R3hdm4Q4VBF2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
R3hdm4Q4VBF2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.85■■□□□ 1.09
R3hdm4Q4VBF2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
R3hdm4Q4VBF2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
R3hdm4Q4VBF2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
R3hdm4Q4VBF2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
R3hdm4Q4VBF2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
R3hdm4Q4VBF2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
R3hdm4Q4VBF2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
R3hdm4Q4VBF2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
R3hdm4Q4VBF2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
R3hdm4Q4VBF2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.84■■□□□ 1.09
R3hdm4Q4VBF2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
R3hdm4Q4VBF2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
R3hdm4Q4VBF2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
R3hdm4Q4VBF2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
R3hdm4Q4VBF2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
R3hdm4Q4VBF2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
R3hdm4Q4VBF2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
R3hdm4Q4VBF2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
R3hdm4Q4VBF2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
R3hdm4Q4VBF2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
R3hdm4Q4VBF2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
R3hdm4Q4VBF2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
R3hdm4Q4VBF2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
R3hdm4Q4VBF2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
R3hdm4Q4VBF2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.82■■□□□ 1.08
R3hdm4Q4VBF2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
R3hdm4Q4VBF2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
R3hdm4Q4VBF2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
R3hdm4Q4VBF2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
R3hdm4Q4VBF2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
R3hdm4Q4VBF2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.81■■□□□ 1.08
R3hdm4Q4VBF2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
R3hdm4Q4VBF2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
R3hdm4Q4VBF2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
R3hdm4Q4VBF2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
R3hdm4Q4VBF2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.81■■□□□ 1.08
R3hdm4Q4VBF2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
R3hdm4Q4VBF2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
R3hdm4Q4VBF2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
R3hdm4Q4VBF2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3hdm4Q4VBF2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3hdm4Q4VBF2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3hdm4Q4VBF2 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.8■■□□□ 1.08
R3hdm4Q4VBF2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3hdm4Q4VBF2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3hdm4Q4VBF2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
R3hdm4Q4VBF2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
R3hdm4Q4VBF2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms