Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim63Q38HM4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim63Q38HM4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim63Q38HM4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trim63Q38HM4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim63Q38HM4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim63Q38HM4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim63Q38HM4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim63Q38HM4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim63Q38HM4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim63Q38HM4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim63Q38HM4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim63Q38HM4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim63Q38HM4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim63Q38HM4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim63Q38HM4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim63Q38HM4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim63Q38HM4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim63Q38HM4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim63Q38HM4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim63Q38HM4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim63Q38HM4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim63Q38HM4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim63Q38HM4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim63Q38HM4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim63Q38HM4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim63Q38HM4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.72■□□□□ 0.27
Trim63Q38HM4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim63Q38HM4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim63Q38HM4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim63Q38HM4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim63Q38HM4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim63Q38HM4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim63Q38HM4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trim63Q38HM4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim63Q38HM4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim63Q38HM4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim63Q38HM4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim63Q38HM4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim63Q38HM4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim63Q38HM4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim63Q38HM4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim63Q38HM4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim63Q38HM4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim63Q38HM4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim63Q38HM4 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.7■□□□□ 0.26
Trim63Q38HM4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim63Q38HM4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim63Q38HM4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim63Q38HM4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim63Q38HM4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim63Q38HM4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim63Q38HM4 Gm26115-201ENSMUST00000175605 87 ntBASIC16.69■□□□□ 0.26
Trim63Q38HM4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim63Q38HM4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim63Q38HM4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms