Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RetP35546 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RetP35546 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RetP35546 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RetP35546 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RetP35546 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RetP35546 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RetP35546 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RetP35546 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RetP35546 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RetP35546 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RetP35546 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RetP35546 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RetP35546 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RetP35546 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RetP35546 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RetP35546 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RetP35546 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.87■□□□□ 0.61
RetP35546 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RetP35546 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RetP35546 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RetP35546 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RetP35546 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RetP35546 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RetP35546 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RetP35546 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RetP35546 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RetP35546 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RetP35546 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RetP35546 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RetP35546 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RetP35546 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RetP35546 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RetP35546 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RetP35546 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RetP35546 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RetP35546 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RetP35546 Gm18284-201ENSMUST00000172604 624 ntBASIC18.85■□□□□ 0.61
RetP35546 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RetP35546 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RetP35546 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RetP35546 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RetP35546 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RetP35546 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.85■□□□□ 0.61
RetP35546 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RetP35546 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RetP35546 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RetP35546 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RetP35546 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RetP35546 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RetP35546 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RetP35546 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.84■□□□□ 0.61
RetP35546 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.84■□□□□ 0.61
RetP35546 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RetP35546 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.84■□□□□ 0.61
RetP35546 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RetP35546 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.84■□□□□ 0.61
RetP35546 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RetP35546 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RetP35546 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RetP35546 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RetP35546 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RetP35546 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RetP35546 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RetP35546 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RetP35546 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RetP35546 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RetP35546 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RetP35546 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RetP35546 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.83■□□□□ 0.6
RetP35546 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RetP35546 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RetP35546 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.83■□□□□ 0.6
RetP35546 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RetP35546 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RetP35546 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RetP35546 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.82■□□□□ 0.6
RetP35546 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RetP35546 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RetP35546 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RetP35546 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.82■□□□□ 0.6
RetP35546 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RetP35546 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RetP35546 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RetP35546 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RetP35546 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RetP35546 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.82■□□□□ 0.6
RetP35546 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RetP35546 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RetP35546 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.81■□□□□ 0.6
RetP35546 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.81■□□□□ 0.6
RetP35546 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RetP35546 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RetP35546 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RetP35546 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RetP35546 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.81■□□□□ 0.6
RetP35546 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RetP35546 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RetP35546 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RetP35546 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms