Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a13P31649 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a13P31649 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a13P31649 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a13P31649 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a13P31649 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a13P31649 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a13P31649 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Slc6a13P31649 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Slc6a13P31649 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
Slc6a13P31649 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Slc6a13P31649 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a13P31649 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a13P31649 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a13P31649 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a13P31649 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a13P31649 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.58■□□□□ 0.89
Slc6a13P31649 Gm43530-201ENSMUST00000195920 274 ntBASIC20.58■□□□□ 0.89
Slc6a13P31649 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a13P31649 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc6a13P31649 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc6a13P31649 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Slc6a13P31649 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a13P31649 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a13P31649 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a13P31649 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a13P31649 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Slc6a13P31649 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a13P31649 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a13P31649 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Slc6a13P31649 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a13P31649 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a13P31649 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Slc6a13P31649 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a13P31649 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a13P31649 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a13P31649 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.55■□□□□ 0.88
Slc6a13P31649 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a13P31649 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a13P31649 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.55■□□□□ 0.88
Slc6a13P31649 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a13P31649 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.55■□□□□ 0.88
Slc6a13P31649 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.55■□□□□ 0.88
Slc6a13P31649 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.55■□□□□ 0.88
Slc6a13P31649 Golgb1-201ENSMUST00000023534 498 ntBASIC20.55■□□□□ 0.88
Slc6a13P31649 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a13P31649 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a13P31649 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a13P31649 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a13P31649 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a13P31649 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a13P31649 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.54■□□□□ 0.88
Slc6a13P31649 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a13P31649 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a13P31649 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Slc6a13P31649 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a13P31649 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a13P31649 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a13P31649 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a13P31649 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a13P31649 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a13P31649 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a13P31649 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a13P31649 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Slc6a13P31649 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a13P31649 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a13P31649 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a13P31649 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a13P31649 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a13P31649 Gm12922-201ENSMUST00000120626 809 ntBASIC20.52■□□□□ 0.88
Slc6a13P31649 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a13P31649 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a13P31649 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a13P31649 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a13P31649 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a13P31649 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Slc6a13P31649 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc6a13P31649 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Slc6a13P31649 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc6a13P31649 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a13P31649 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a13P31649 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a13P31649 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a13P31649 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a13P31649 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Slc6a13P31649 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Slc6a13P31649 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a13P31649 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Slc6a13P31649 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a13P31649 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Slc6a13P31649 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a13P31649 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.5■□□□□ 0.87
Slc6a13P31649 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Slc6a13P31649 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a13P31649 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.5■□□□□ 0.87
Slc6a13P31649 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a13P31649 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a13P31649 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a13P31649 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a13P31649 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms