Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3727J3QM54 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3727J3QM54 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3727J3QM54 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm3727J3QM54 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm3727J3QM54 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3727J3QM54 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3727J3QM54 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3727J3QM54 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3727J3QM54 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3727J3QM54 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3727J3QM54 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3727J3QM54 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3727J3QM54 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3727J3QM54 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3727J3QM54 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3727J3QM54 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3727J3QM54 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Gm3727J3QM54 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3727J3QM54 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3727J3QM54 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3727J3QM54 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.16■□□□□ 0.34
Gm3727J3QM54 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.16■□□□□ 0.34
Gm3727J3QM54 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3727J3QM54 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3727J3QM54 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm3727J3QM54 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3727J3QM54 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.15■□□□□ 0.34
Gm3727J3QM54 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3727J3QM54 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.15■□□□□ 0.34
Gm3727J3QM54 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm3727J3QM54 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3727J3QM54 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm3727J3QM54 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm3727J3QM54 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3727J3QM54 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3727J3QM54 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3727J3QM54 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3727J3QM54 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm3727J3QM54 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3727J3QM54 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3727J3QM54 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3727J3QM54 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3727J3QM54 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm3727J3QM54 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3727J3QM54 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm3727J3QM54 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm3727J3QM54 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm3727J3QM54 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.14■□□□□ 0.33
Gm3727J3QM54 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Gm3727J3QM54 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3727J3QM54 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3727J3QM54 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm3727J3QM54 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3727J3QM54 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3727J3QM54 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3727J3QM54 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3727J3QM54 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3727J3QM54 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm3727J3QM54 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm3727J3QM54 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.13■□□□□ 0.33
Gm3727J3QM54 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.13■□□□□ 0.33
Gm3727J3QM54 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3727J3QM54 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3727J3QM54 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3727J3QM54 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3727J3QM54 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3727J3QM54 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3727J3QM54 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.12■□□□□ 0.33
Gm3727J3QM54 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Gm3727J3QM54 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3727J3QM54 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3727J3QM54 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3727J3QM54 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3727J3QM54 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3727J3QM54 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm3727J3QM54 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm3727J3QM54 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.11■□□□□ 0.33
Gm3727J3QM54 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3727J3QM54 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3727J3QM54 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3727J3QM54 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm3727J3QM54 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm3727J3QM54 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm3727J3QM54 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm3727J3QM54 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3727J3QM54 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3727J3QM54 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3727J3QM54 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3727J3QM54 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3727J3QM54 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3727J3QM54 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3727J3QM54 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.09■□□□□ 0.33
Gm3727J3QM54 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3727J3QM54 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm3727J3QM54 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm3727J3QM54 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3727J3QM54 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3727J3QM54 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3727J3QM54 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms