Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Herc1E9PZP8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Herc1E9PZP8 Gm9988-201ENSMUST00000069786 435 ntBASIC11.77□□□□□ -0.53
Herc1E9PZP8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Herc1E9PZP8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Herc1E9PZP8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Herc1E9PZP8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Herc1E9PZP8 Gm27275-201ENSMUST00000184318 272 ntBASIC11.76□□□□□ -0.53
Herc1E9PZP8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Herc1E9PZP8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Herc1E9PZP8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Herc1E9PZP8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.76□□□□□ -0.53
Herc1E9PZP8 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.76□□□□□ -0.53
Herc1E9PZP8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC11.76□□□□□ -0.53
Herc1E9PZP8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Herc1E9PZP8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Herc1E9PZP8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Herc1E9PZP8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Herc1E9PZP8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Herc1E9PZP8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Herc1E9PZP8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.75□□□□□ -0.53
Herc1E9PZP8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Herc1E9PZP8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Herc1E9PZP8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.75□□□□□ -0.53
Herc1E9PZP8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC11.75□□□□□ -0.53
Herc1E9PZP8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.75□□□□□ -0.53
Herc1E9PZP8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Herc1E9PZP8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Herc1E9PZP8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Herc1E9PZP8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc1E9PZP8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc1E9PZP8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc1E9PZP8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Herc1E9PZP8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC11.74□□□□□ -0.53
Herc1E9PZP8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc1E9PZP8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Herc1E9PZP8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Herc1E9PZP8 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.74□□□□□ -0.53
Herc1E9PZP8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Herc1E9PZP8 Gm7461-201ENSMUST00000058918 827 ntBASIC11.74□□□□□ -0.53
Herc1E9PZP8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc1E9PZP8 Gm37055-201ENSMUST00000191866 133 ntBASIC11.73□□□□□ -0.53
Herc1E9PZP8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Herc1E9PZP8 Gm43799-201ENSMUST00000201845 579 ntBASIC11.73□□□□□ -0.53
Herc1E9PZP8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc1E9PZP8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc1E9PZP8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc1E9PZP8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Herc1E9PZP8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc1E9PZP8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Herc1E9PZP8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc1E9PZP8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC11.72□□□□□ -0.53
Herc1E9PZP8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc1E9PZP8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc1E9PZP8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.72□□□□□ -0.53
Herc1E9PZP8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Herc1E9PZP8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc1E9PZP8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
Herc1E9PZP8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Herc1E9PZP8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc1E9PZP8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Herc1E9PZP8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Herc1E9PZP8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.71□□□□□ -0.53
Herc1E9PZP8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Herc1E9PZP8 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.71□□□□□ -0.53
Herc1E9PZP8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Herc1E9PZP8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Herc1E9PZP8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Herc1E9PZP8 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.71□□□□□ -0.53
Herc1E9PZP8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.71□□□□□ -0.53
Herc1E9PZP8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Herc1E9PZP8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Herc1E9PZP8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.71□□□□□ -0.54
Herc1E9PZP8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Herc1E9PZP8 Gm4430-201ENSMUST00000192413 1943 ntBASIC11.7□□□□□ -0.54
Herc1E9PZP8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Herc1E9PZP8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Herc1E9PZP8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Herc1E9PZP8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Herc1E9PZP8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Herc1E9PZP8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.7□□□□□ -0.54
Herc1E9PZP8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Herc1E9PZP8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.7□□□□□ -0.54
Herc1E9PZP8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Herc1E9PZP8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Herc1E9PZP8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Herc1E9PZP8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Herc1E9PZP8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Herc1E9PZP8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Herc1E9PZP8 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.69□□□□□ -0.54
Herc1E9PZP8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Herc1E9PZP8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Herc1E9PZP8 Gm6659-201ENSMUST00000174752 547 ntBASIC11.69□□□□□ -0.54
Herc1E9PZP8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Herc1E9PZP8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Herc1E9PZP8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Herc1E9PZP8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Herc1E9PZP8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Herc1E9PZP8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Herc1E9PZP8 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms