Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.82■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpl9-ps6A0A140T8T4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.81■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Mir7075-201ENSMUST00000184187 82 ntBASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Mir6236-201ENSMUST00000184437 123 ntBASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.78■□□□□ 0.92
Rpl9-ps6A0A140T8T4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.78■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.77■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rpl9-ps6A0A140T8T4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.76■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.76■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Rpl9-ps6A0A140T8T4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Gm6139-201ENSMUST00000079261 882 ntBASIC20.75■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.74■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.74■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.72■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl9-ps6A0A140T8T4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms