Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv1A0A0B4J1G7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trbv1A0A0B4J1G7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv1A0A0B4J1G7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Trbv1A0A0B4J1G7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv1A0A0B4J1G7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv1A0A0B4J1G7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv1A0A0B4J1G7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv1A0A0B4J1G7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv1A0A0B4J1G7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv1A0A0B4J1G7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv1A0A0B4J1G7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.74■□□□□ 0.11
Trbv1A0A0B4J1G7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv1A0A0B4J1G7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv1A0A0B4J1G7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv1A0A0B4J1G7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv1A0A0B4J1G7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Trbv1A0A0B4J1G7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv1A0A0B4J1G7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv1A0A0B4J1G7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv1A0A0B4J1G7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv1A0A0B4J1G7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv1A0A0B4J1G7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv1A0A0B4J1G7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv1A0A0B4J1G7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.73■□□□□ 0.11
Trbv1A0A0B4J1G7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv1A0A0B4J1G7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trbv1A0A0B4J1G7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv1A0A0B4J1G7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trbv1A0A0B4J1G7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv1A0A0B4J1G7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv1A0A0B4J1G7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv1A0A0B4J1G7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv1A0A0B4J1G7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv1A0A0B4J1G7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv1A0A0B4J1G7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv1A0A0B4J1G7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv1A0A0B4J1G7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv1A0A0B4J1G7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trbv1A0A0B4J1G7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv1A0A0B4J1G7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trbv1A0A0B4J1G7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv1A0A0B4J1G7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv1A0A0B4J1G7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv1A0A0B4J1G7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Trbv1A0A0B4J1G7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv1A0A0B4J1G7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv1A0A0B4J1G7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv1A0A0B4J1G7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trbv1A0A0B4J1G7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv1A0A0B4J1G7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv1A0A0B4J1G7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms