Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Sirpb1bA0A0A6YXN8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1bA0A0A6YXN8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1bA0A0A6YXN8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1bA0A0A6YXN8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1bA0A0A6YXN8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.77■□□□□ 0.44
Sirpb1bA0A0A6YXN8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sirpb1bA0A0A6YXN8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.77■□□□□ 0.44
Sirpb1bA0A0A6YXN8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.77■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Golph3-202ENSMUST00000226517 2359 ntBASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1bA0A0A6YXN8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sirpb1bA0A0A6YXN8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.75■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.74■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.74■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.74■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.72■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.72■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Gm21956-201ENSMUST00000179946 522 ntBASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sirpb1bA0A0A6YXN8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.7■□□□□ 0.42
Sirpb1bA0A0A6YXN8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1bA0A0A6YXN8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1bA0A0A6YXN8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1bA0A0A6YXN8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1bA0A0A6YXN8 Gm10399-202ENSMUST00000202768 748 ntBASIC17.7■□□□□ 0.42
Sirpb1bA0A0A6YXN8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sirpb1bA0A0A6YXN8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1bA0A0A6YXN8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sirpb1bA0A0A6YXN8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sirpb1bA0A0A6YXN8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms