Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav17A0A075B655 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav17A0A075B655 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav17A0A075B655 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.04■□□□□ 0.16
Trav17A0A075B655 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav17A0A075B655 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav17A0A075B655 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav17A0A075B655 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
Trav17A0A075B655 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav17A0A075B655 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav17A0A075B655 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav17A0A075B655 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav17A0A075B655 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav17A0A075B655 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav17A0A075B655 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trav17A0A075B655 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav17A0A075B655 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav17A0A075B655 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trav17A0A075B655 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.02■□□□□ 0.15
Trav17A0A075B655 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav17A0A075B655 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav17A0A075B655 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav17A0A075B655 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav17A0A075B655 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav17A0A075B655 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav17A0A075B655 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.01■□□□□ 0.15
Trav17A0A075B655 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trav17A0A075B655 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav17A0A075B655 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav17A0A075B655 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav17A0A075B655 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav17A0A075B655 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav17A0A075B655 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Trav17A0A075B655 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav17A0A075B655 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav17A0A075B655 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Trav17A0A075B655 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16■□□□□ 0.15
Trav17A0A075B655 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav17A0A075B655 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trav17A0A075B655 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav17A0A075B655 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16■□□□□ 0.15
Trav17A0A075B655 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav17A0A075B655 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav17A0A075B655 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav17A0A075B655 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav17A0A075B655 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav17A0A075B655 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.99■□□□□ 0.15
Trav17A0A075B655 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav17A0A075B655 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav17A0A075B655 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav17A0A075B655 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav17A0A075B655 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav17A0A075B655 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trav17A0A075B655 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav17A0A075B655 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav17A0A075B655 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav17A0A075B655 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav17A0A075B655 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav17A0A075B655 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav17A0A075B655 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav17A0A075B655 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav17A0A075B655 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav17A0A075B655 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav17A0A075B655 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav17A0A075B655 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav17A0A075B655 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms