Protein–RNA interactions for Protein: Q9R0W9

Chrna6, Neuronal acetylcholine receptor subunit alpha-6, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6Q9R0W9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chrna6Q9R0W9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chrna6Q9R0W9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Chrna6Q9R0W9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.64■□□□□ 0.9
Chrna6Q9R0W9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna6Q9R0W9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna6Q9R0W9 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.64■□□□□ 0.89
Chrna6Q9R0W9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna6Q9R0W9 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.64■□□□□ 0.89
Chrna6Q9R0W9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chrna6Q9R0W9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna6Q9R0W9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Chrna6Q9R0W9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna6Q9R0W9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Chrna6Q9R0W9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna6Q9R0W9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna6Q9R0W9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna6Q9R0W9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chrna6Q9R0W9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Chrna6Q9R0W9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna6Q9R0W9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna6Q9R0W9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.62■□□□□ 0.89
Chrna6Q9R0W9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna6Q9R0W9 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.62■□□□□ 0.89
Chrna6Q9R0W9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna6Q9R0W9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Chrna6Q9R0W9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna6Q9R0W9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Chrna6Q9R0W9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chrna6Q9R0W9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chrna6Q9R0W9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chrna6Q9R0W9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Chrna6Q9R0W9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chrna6Q9R0W9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chrna6Q9R0W9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chrna6Q9R0W9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.61■□□□□ 0.89
Chrna6Q9R0W9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chrna6Q9R0W9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chrna6Q9R0W9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Chrna6Q9R0W9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.6■□□□□ 0.89
Chrna6Q9R0W9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chrna6Q9R0W9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Chrna6Q9R0W9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.6■□□□□ 0.89
Chrna6Q9R0W9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.6■□□□□ 0.89
Chrna6Q9R0W9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chrna6Q9R0W9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chrna6Q9R0W9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Chrna6Q9R0W9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.59■□□□□ 0.89
Chrna6Q9R0W9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chrna6Q9R0W9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chrna6Q9R0W9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chrna6Q9R0W9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Chrna6Q9R0W9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chrna6Q9R0W9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chrna6Q9R0W9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chrna6Q9R0W9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.58■□□□□ 0.89
Chrna6Q9R0W9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chrna6Q9R0W9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chrna6Q9R0W9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.58■□□□□ 0.88
Chrna6Q9R0W9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chrna6Q9R0W9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Chrna6Q9R0W9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna6Q9R0W9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Chrna6Q9R0W9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna6Q9R0W9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna6Q9R0W9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.56■□□□□ 0.88
Chrna6Q9R0W9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna6Q9R0W9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna6Q9R0W9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna6Q9R0W9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna6Q9R0W9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Chrna6Q9R0W9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna6Q9R0W9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Chrna6Q9R0W9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna6Q9R0W9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna6Q9R0W9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna6Q9R0W9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna6Q9R0W9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna6Q9R0W9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna6Q9R0W9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna6Q9R0W9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna6Q9R0W9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna6Q9R0W9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna6Q9R0W9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna6Q9R0W9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Chrna6Q9R0W9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Chrna6Q9R0W9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna6Q9R0W9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna6Q9R0W9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna6Q9R0W9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms